RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 LGALS12Q96DT0 336 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 NUS1Q96E22 293 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 SGK494Q96LW2 274 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 TSSK2Q96PF2 358 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR5B12Q96R08 314 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 NDUFAF3Q9BU61 184 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 MCRIP2Q9BUT9 160 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 FUNDC2Q9BWH2 189 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 RAB34Q9BZG1 259 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 PPA2Q9H2U2 334 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 BOLA2Q9H3K6 86 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 C6orf50Q9HD87 102 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 IL1RAPQ9NPH3 570 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 MRPL17Q9NRX2 175 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 C1orf123Q9NWV4 160 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CLN6Q9NWW5 311 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 DDIT4Q9NX09 232 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 GNG12Q9UBI6 72 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 TFR2Q9UP52 801 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 MRPS28Q9Y2Q9 187 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 LSM4Q9Y4Z0 139 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 PEX16Q9Y5Y5 336 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ZNF518AQ6AHZ1 1483 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 SH3PXD2BA1X283 911 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 VSTM2BA6NLU5 285 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PP2D1A8MPX8 630 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PRSS46E5RG02 174 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 H3BTX0 84 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 KCNK1O00180 336 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 SIRPB1O00241 398 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 ARPC1BO15143 372 aaKnown RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 UBDO15205 165 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 SLC31A1O15431 190 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 XRCC3O43542 346 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 TPST1O60507 370 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 DCTN3O75935 186 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 KRT33AO76009 404 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 ZNF432O94892 652 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 ATP6V1G2O95670 118 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 FAM107AO95990 144 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 CYB5R3P00387 301 aaPredicted RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 CGAP01215 116 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PCCAP05165 728 aaPredicted RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 SERPINA2P20848 420 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 FCARP24071 287 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 F2RP25116 425 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PRDX3P30048 256 aaKnown RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 RPS9P46781 194 aaKnown RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 CCR6P51684 374 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 AKR1D1P51857 326 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 UGT2B15P54855 530 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 RAG2P55895 527 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 DLX5P56178 289 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 SNAP25P60880 206 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 NUTF2P61970 127 aaKnown RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 FKBP1BP68106 108 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 HMGCS1Q01581 520 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PAX2Q02962 417 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 KLRC3Q07444 240 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 TPBGQ13641 420 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 MELKQ14680 651 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PTGISQ16647 500 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 HLA-BQ31612 363 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 ARHGAP11BQ3KRB8 267 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 RNF212Q495C1 297 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 EIPR1Q53HC9 387 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PPM1LQ5SGD2 360 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 NSUN5P2Q63ZY6 315 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 ZNF776Q68DI1 518 aaPredicted RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 CYB5R2Q6BCY4 276 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 ADNP2Q6IQ32 1131 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 DHRS4L2Q6PKH6 230 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 UQCC3Q6UW78 93 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PARM1Q6UWI2 310 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMG8-205ENST00000580798 ZNF841Q6ZN19 808 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 DPY19L2P2Q6ZN68 376 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 OR2W3Q7Z3T1 314 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 CTU1Q7Z7A3 348 aaKnown RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 TMEM135Q86UB9 458 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 HAPLN4Q86UW8 402 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 PARGQ86W56 976 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 C2orf73Q8N5S3 287 aaPredicted RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 CLDN22Q8N7P3 220 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 EXD3Q8N9H8 876 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 WDSUB1Q8N9V3 476 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 OR2AK2Q8NG84 335 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 OR4F15Q8NGB8 312 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 OR52H1Q8NGJ2 320 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 GPR151Q8TDV0 419 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 SKA2Q8WVK7 121 aaPredicted RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 C1orf54Q8WWF1 131 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 DNAJC9Q8WXX5 260 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 C11orf40Q8WZ69 217 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 RORBQ92753 470 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 DCPSQ96C86 337 aaKnown RBP3.54□□□□□ -1.84
SMG8-205ENST00000580798 TLCD1Q96CP7 247 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 CXorf40BQ96DE9 158 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 TMEM80Q96HE8 168 aa3.54□□□□□ -1.84
SMG8-205ENST00000580798 URB1-AS1Q96HZ7 61 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms