RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	EFCAB1	Q9HAE3	211 aa		13.46	□□□□□ -0.25
PMP22-208	ENST00000580584	B3GNT2	Q9NY97	397 aa		13.46	□□□□□ -0.25
PMP22-208	ENST00000580584	GLTP	Q9NZD2	209 aa		13.46	□□□□□ -0.25
PMP22-208	ENST00000580584	ZNF224	Q9NZL3	707 aa		13.46	□□□□□ -0.25
PMP22-208	ENST00000580584	RHCG	Q9UBD6	479 aa		13.46	□□□□□ -0.25
PMP22-208	ENST00000580584	A4GNT	Q9UNA3	340 aa		13.46	□□□□□ -0.25
PMP22-208	ENST00000580584	MED31	Q9Y3C7	131 aa		13.46	□□□□□ -0.25
PMP22-208	ENST00000580584		J3KTA2	159 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	GSTA4	O15217	222 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	BCL10	O95999	233 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	IFNW1	P05000	195 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	OR4A8	P0C604	315 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	PATE4	P0C8F1	98 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	PGA4	P0DJD7	388 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	PGA3	P0DJD8	388 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	THRB	P10828	461 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	NCK1	P16333	377 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	DRD4	P21917	467 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	SERPINF1	P36955	418 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	SNRPD2	P62316	118 aa	Known RBP	13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	SWI5	Q1ZZU3	235 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	GSG1	Q2KHT4	349 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	LRFN4	Q6PJG9	635 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	HACD2	Q6Y1H2	254 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF627	Q7L945	461 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	MEX3D	Q86XN8	651 aa	Known RBP	13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	CCDC36	Q8IYA8	594 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	RBM15B	Q8NDT2	890 aa	Known RBP	13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	MOSPD2	Q8NHP6	518 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584	LZIC	Q8WZA0	190 aa		13.45	□□□□□ -0.26
PMP22-208	ENST00000580584		A0A1W2PRG6	482 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	INAFM1	C9JVW0	142 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	MCIDAS	D6RGH6	385 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	SNX3	O60493	162 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	SERPINA1	P01009	418 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	IGHG1	P01857	330 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	BMP4	P12644	408 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	LSP1	P33241	339 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	THBS4	P35443	961 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	PTDSS1	P48651	473 aa	Known RBP	13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	MYBPC1	Q00872	1141 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	ST3GAL3	Q11203	375 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	KRT80	Q6KB66	452 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	CLEC2A	Q6UVW9	174 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	SYT14	Q8NB59	555 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	NUP37	Q8NFH4	326 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	OR4F15	Q8NGB8	312 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	GEMIN6	Q8WXD5	167 aa	Known RBP	13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	NANOS1	Q8WY41	292 aa	Known RBP	13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	CMTM5	Q96DZ9	223 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	HSH2D	Q96JZ2	352 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	SORCS2	Q96PQ0	1159 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF347	Q96SE7	839 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	RHNO1	Q9BSD3	238 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	NSRP1	Q9H0G5	558 aa	Known RBP	13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	INIP	Q9NRY2	104 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	MAN2C1	Q9NTJ4	1040 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	PMF1-BGLAP	U3KQ54	211 aa		13.44	□□□□□ -0.26
PMP22-208	ENST00000580584	NAV3	Q8IVL0	2385 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	FFAR1	O14842	300 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	IGF2	P01344	180 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	QDPR	P09417	244 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	IFI30	P13284	250 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF14	P17017	642 aa	Predicted RBP	13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	GIPR	P48546	466 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	EFNA4	P52798	201 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	CLRN1	P58418	232 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	PSME3	P61289	254 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	SNTB2	Q13425	540 aa	Known RBP	13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	IFI44L	Q53G44	452 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	FKBP9P1	Q75LS8	142 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	CBLL1	Q75N03	491 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	SKA3	Q8IX90	412 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	OFCC1	Q8IZS5	231 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	SLC22A24	Q8N4F4	322 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	ANKS4B	Q8N8V4	417 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	NOXO1	Q8NFA2	376 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	OR10H5	Q8NGA6	315 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	FGFBP3	Q8TAT2	258 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	ASB10	Q8WXI3	467 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	FAM162A	Q96A26	154 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	BPIFA2	Q96DR5	249 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF75A	Q96N20	296 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	SH3GL3	Q99963	347 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	FNDC11	Q9BVV2	318 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	TMEM38B	Q9NVV0	291 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	ABCD2	Q9UBJ2	740 aa		13.43	□□□□□ -0.26
PMP22-208	ENST00000580584	DHH	O43323	396 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	TRMU	O75648	421 aa	Known RBP	13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	PDE5A	O76074	875 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	UBL3	O95164	117 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	RAB36	O95755	333 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	TSPAN19	P0C672	248 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	MAK	P20794	623 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	IFNA8	P32881	189 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	DAP3	P51398	398 aa	Known RBP	13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	RAB1A	P62820	205 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	GNGT1	P63211	74 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	TOP3A	Q13472	1001 aa	Predicted RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms