RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 HTR1AP08908 422 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ASAH2BP0C7U1 165 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ADORA3P0DMS8 318 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 COX6B1P14854 86 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 JUNBP17275 347 aaPredicted RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 GABRB1P18505 474 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 GGT2P36268 569 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 UGT2B10P36537 528 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 CD79BP40259 229 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 FXYD6P3P58550 94 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 LCN6P62502 163 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 TUBA1BP68363 451 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 RPL18Q07020 188 aaKnown RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 PUDPQ08623 228 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ST3GAL3Q11203 375 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 FAPQ12884 760 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 CDK5R2Q13319 367 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 PMS2P3Q13401 168 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 TOP3AQ13472 1001 aaPredicted RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 MAD2L1BPQ15013 274 aaPredicted RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 SF3B4Q15427 424 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 FBXL19-AS1Q494R0 122 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 OTPQ5XKR4 325 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 PGBD2Q6P3X8 592 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 KLHL17Q6TDP4 642 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 NHLRC1Q6VVB1 395 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 STAC2Q6ZMT1 411 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF730Q6ZMV8 503 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 TUBA1AQ71U36 451 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 NANOGNBQ7Z5D8 188 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 GALNT5Q7Z7M9 940 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ALPK2Q86TB3 2170 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 DMRTC2Q8IXT2 367 aaPredicted RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 GABRG1Q8N1C3 465 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 SLC43A2Q8N370 569 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF786Q8N393 782 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 LINC00471Q8N535 108 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ATG16L2Q8NAA4 619 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 OR5J2Q8NH18 312 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 APH1BQ8WW43 257 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 S100PBPQ96BU1 408 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 SGTBQ96EQ0 304 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 HS3ST6Q96QI5 342 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 NAA11Q9BSU3 229 aaPredicted RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 FNDC11Q9BVV2 318 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 PIGMQ9H3S5 423 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 PLSCR4Q9NRQ2 329 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 MRPL39Q9NYK5 338 aaKnown RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 NDUFA13Q9P0J0 144 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ENOPH1Q9UHY7 261 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 MGAT4BQ9UQ53 548 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 CACNA1DQ01668 2161 aa6.96□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF469Q96JG9 3925 aaPredicted RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 IGKV1D-43A0A0B4J1Z2 117 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF503-AS2A6NEH8 195 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ZAR1LA6NP61 321 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 MCIDASD6RGH6 385 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 BLOC1S5-TXNDC5H3BN57 136 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 SLC1A7O00341 560 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 KLF4O43474 513 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 DNPH1O43598 174 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 EIF1BO60739 113 aaKnown RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 MRPS14O60783 128 aaKnown RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 WBP4O75554 376 aaKnown RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 GASTP01350 101 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 IFNGR1P15260 489 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 COX5AP20674 150 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 AHCYP23526 432 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 RBM34P42696 430 aaKnown RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 OMPP47874 163 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 CDH15P55291 814 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ESRRGP62508 458 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 FMODQ06828 376 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 SPOCK1Q08629 439 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 CAMK2DQ13557 499 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 TRAM2Q15035 370 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 STK11Q15831 433 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 HIKESHIQ53FT3 197 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 TMEM225Q6GV28 225 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 C1orf94Q6P1W5 598 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF773Q6PK81 442 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 SEZ6L2Q6UXD5 910 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 THSD4Q6ZMP0 1018 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 MBOAT2Q6ZWT7 520 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 H1FNTQ75WM6 255 aaPredicted RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 AAED1Q7RTV5 226 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF100Q8IYN0 542 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 TMEM123Q8N131 208 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 UBE2J2Q8N2K1 259 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 AQP11Q8NBQ7 271 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 OR4K5Q8NGD3 323 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 OR51A7Q8NH64 312 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ACOT11Q8WXI4 607 aaPredicted RBP6.96□□□□□ -1.3
CCDC40-215ENST00000576033 APH1AQ96BI3 265 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 BPIFA2Q96DR5 249 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 MPP4Q96JB8 637 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 WFIKKN1Q96NZ8 548 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 OR2M2Q96R28 347 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 APOL4Q9BPW4 351 aa6.96□□□□□ -1.3
CCDC40-215ENST00000576033 ASPNQ9BXN1 380 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms