RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 NR2C1P13056 603 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 RHCEP18577 417 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 ARR3P36575 388 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 PTH2RP49190 550 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 ZNF84P51523 738 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 SPOCK1Q08629 439 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 NPRL3Q12980 569 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 FGD3Q5JSP0 725 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 PHYHD1Q5SRE7 291 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 YTHDF3Q7Z739 585 aaKnown RBP11.93□□□□□ -0.5
CNOT1-206ENST00000564557 OAFQ86UD1 273 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 LIPHQ8WWY8 451 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 ZNF837Q96EG3 531 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-206ENST00000564557 PYURFQ96I23 114 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 FOXB1Q99853 325 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 GSX2Q9BZM3 304 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 ANKRD19PQ9H560 264 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 NMNAT1Q9HAN9 279 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-206ENST00000564557 ADAM21Q9UKJ8 722 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 MOKQ9UQ07 419 aa11.93□□□□□ -0.5
CNOT1-206ENST00000564557 ARID1AO14497 2285 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 E7EQL1 145 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 hCG_2039718K7EN88 272 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 SOD3P08294 240 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 DANCRP0C864 163 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 B4GALT1P15291 398 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 CBR1P16152 277 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 CALB2P22676 271 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 MSX2P35548 267 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-206ENST00000564557 SLC9A3P48764 834 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 IDH3GP51553 393 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-206ENST00000564557 SMIM11AP58511 58 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 PRKCDQ05655 676 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 CHRNB3Q05901 458 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 ANKDD1AQ495B1 522 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 ZNF544Q6NX49 715 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 PRSS57Q6UWY2 283 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 NHLRC1Q6VVB1 395 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 MBOAT2Q6ZWT7 520 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 MUC15Q8N387 334 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 FAM169BQ8N8A8 192 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 RBM15BQ8NDT2 890 aaKnown RBP11.92□□□□□ -0.5
CNOT1-206ENST00000564557 WFDC11Q8NEX6 87 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 IL17RDQ8NFM7 739 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 MOSPD2Q8NHP6 518 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 TMEM54Q969K7 222 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 KATNB1Q9BVA0 655 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 TMEM5Q9Y2B1 443 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 ALPK2Q86TB3 2170 aa11.92□□□□□ -0.5
CNOT1-206ENST00000564557 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-206ENST00000564557 A0A087WUU8 490 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 CENPBD1B2RD01 187 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 FFAR1O14842 300 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 ARPC2O15144 300 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 DHHO43323 396 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 RAB36O95755 333 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 QDPRP09417 244 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 ACADSP16219 412 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 APOBEC3AP31941 199 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-206ENST00000564557 TTKP33981 857 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 RPL4P36578 427 aaKnown RBP11.91□□□□□ -0.5
CNOT1-206ENST00000564557 CDKN1AP38936 164 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 GUCA1AP43080 201 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-206ENST00000564557 CTXN1P60606 82 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 PIGFQ07326 219 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 TOP3AQ13472 1001 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-206ENST00000564557 GSG1Q2KHT4 349 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 PGGHGQ32M88 737 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 C3orf36Q3SXR2 165 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 PIWIL3Q7Z3Z3 882 aaKnown RBP11.91□□□□□ -0.5
CNOT1-206ENST00000564557 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 SYT14Q8NB59 555 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 OR51A7Q8NH64 312 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 ASB10Q8WXI3 467 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 RBP7Q96R05 134 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 BDH2Q9BUT1 245 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-206ENST00000564557 KCNN2Q9H2S1 579 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 NELFAQ9H3P2 528 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 RNF121Q9H920 327 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 MAN2C1Q9NTJ4 1040 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 CBLN4Q9NTU7 201 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-206ENST00000564557 NDUFAF4Q9P032 175 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 CD300AQ9UGN4 299 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 AURKCQ9UQB9 309 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 HIF3AQ9Y2N7 669 aa11.91□□□□□ -0.5
CNOT1-206ENST00000564557 HRNRQ86YZ3 2850 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-206ENST00000564557 MED13LQ71F56 2210 aa11.9□□□□□ -0.5
CNOT1-206ENST00000564557 F8P00451 2351 aa11.9□□□□□ -0.5
CNOT1-206ENST00000564557 A0A1W2PRQ8 180 aa11.9□□□□□ -0.5
CNOT1-206ENST00000564557 TRMUO75648 421 aaKnown RBP11.9□□□□□ -0.5
CNOT1-206ENST00000564557 UBL3O95164 117 aa11.9□□□□□ -0.5
CNOT1-206ENST00000564557 IGKV3-15P01624 115 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms