RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 DCAF1Q9Y4B6 1507 aa1.86□□□□□ -2.11
CHD9-209ENST00000564255 HMGXB3Q12766 1538 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 RBMY1BA6NDE4 496 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 RBMY1EA6NEQ0 496 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 DYNC1I1O14576 645 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 AGPAT2O15120 278 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 EIF4E2O60573 245 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 HUS1O60921 280 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 EIF3GO75821 320 aaKnown RBP eCLIP1.85□□□□□ -2.11
CHD9-209ENST00000564255 CRYGCP07315 174 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 RBMY1DP0C7P1 496 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 POLR2MP0CAP2 368 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 RBMY1A1P0DJD3 496 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 SRMP19623 302 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 DCKP27707 260 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 CX3CR1P49238 355 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 MRPL19P49406 292 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 UGT2B15P54855 530 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 APOC4P55056 127 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 SELENOTP62341 195 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 ZNF92Q03936 586 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 XKR4Q5GH76 650 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 IL34Q6ZMJ4 242 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 HDDC2Q7Z4H3 204 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 MICU2Q8IYU8 434 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 LIX1Q8N485 282 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 OR9G1Q8NH87 305 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 FRAT1Q92837 279 aaPredicted RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 ZNF707Q96C28 371 aaPredicted RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 PLEKHF1Q96S99 279 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 NTN4Q9HB63 628 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 ABCD2Q9UBJ2 740 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 ARAP1Q96P48 1450 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 LTBP4Q8N2S1 1624 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 MSH6P52701 1360 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 TNIKQ9UKE5 1360 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 CHD4Q14839 1912 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 ZFP92A6NM28 416 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 ZNF726A6NNF4 738 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 TRDMT1O14717 391 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 PHOX2AO14813 284 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 OTCP00480 354 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 FGGP02679 453 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 SERPINE2P07093 398 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 MYL2P10916 166 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 MSR1P21757 451 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 CPN2P22792 545 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 ANP32AP39687 249 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 NKAIN1Q4KMZ8 207 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 ZNF620Q6ZNG0 422 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 PRR22Q8IZ63 422 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 GPD1LQ8N335 351 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 EID2Q8N6I1 236 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 C14orf178Q8N769 122 aaPredicted RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 TMEM54Q969K7 222 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 OPALINQ96PE5 141 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 SH3GL3Q99963 347 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 TEKT3Q9BXF9 490 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 OR51J1Q9H342 316 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 PLGRKTQ9HBL7 147 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 MRPL22Q9NWU5 206 aaKnown RBP1.85□□□□□ -2.11
CHD9-209ENST00000564255 MTCH1Q9NZJ7 389 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 SLC17A4Q9Y2C5 497 aa1.85□□□□□ -2.11
CHD9-209ENST00000564255 USP27XA6NNY8 438 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 TNFSF11O14788 317 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 SRSF10O75494 262 aaKnown RBP1.84□□□□□ -2.11
CHD9-209ENST00000564255 HPNP05981 417 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 ANXA5P08758 320 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 BCKDHBP21953 392 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 TUBG1P23258 451 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 COX7A1P24310 79 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 SUB1P53999 127 aaKnown RBP eCLIP1.84□□□□□ -2.11
CHD9-209ENST00000564255 CLDN18P56856 261 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 DSCR10P59022 87 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 TAS2R19P59542 299 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 ADARB1P78563 741 aaKnown RBP1.84□□□□□ -2.11
CHD9-209ENST00000564255 IGLV3-21P80748 117 aaPredicted RBP1.84□□□□□ -2.11
CHD9-209ENST00000564255 TMED1Q13445 227 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 CYTH1Q15438 398 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 CCDC14Q49A88 953 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 HIKESHIQ53FT3 197 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 BEX5Q5H9J7 111 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 PLCXD3Q63HM9 321 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 STUMQ69YW2 141 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 CTRB2Q6GPI1 263 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 CD177Q8N6Q3 437 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 OR9G4Q8NGQ1 327 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 NEIL3Q8TAT5 605 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 ANKRD49Q8WVL7 239 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 FCRL1Q96LA6 429 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 GSDMAQ96QA5 445 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 OR11A1Q9GZK7 315 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 POLR2J2Q9GZM3 115 aaKnown RBP1.84□□□□□ -2.11
CHD9-209ENST00000564255 POLR2J3Q9H1A7 115 aaKnown RBP1.84□□□□□ -2.11
CHD9-209ENST00000564255 TUBG2Q9NRH3 451 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 TNFRSF19Q9NS68 423 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 AHSPQ9NZD4 102 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 VSIG4Q9Y279 399 aa1.84□□□□□ -2.11
CHD9-209ENST00000564255 KIF27Q86VH2 1401 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms