RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 EEF1A1P5Q5VTE0 462 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 GTF2IRD2BQ6EKJ0 949 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 B3GNT6Q6ZMB0 384 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 GTF2IRD2Q86UP8 949 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SPARTQ8N0X7 666 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 OR51L1Q8NGJ5 315 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 LGALS12Q96DT0 336 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 ZNF385AQ96PM9 386 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 TUBA1CQ9BQE3 449 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SYT4Q9H2B2 425 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 CCNB1IP1Q9NPC3 277 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 WARS2Q9UGM6 360 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 ING1Q9UK53 422 aaPredicted RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 ZMIZ1Q9ULJ6 1067 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 EXOGQ9Y2C4 368 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 CHD8Q9HCK8 2581 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 A6NIZ1 184 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 APOL3O95236 402 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 SYNGR4O95473 234 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 C21orf33P30042 268 aaPredicted RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 PYCR1P32322 319 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 SLC16A1P53985 500 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 RAP1BP61224 184 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 RPS7P62081 194 aaKnown RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 RAP1AP62834 184 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 RASGEF1BQ0VAM2 473 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 TMED1Q13445 227 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 CAMK2DQ13557 499 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 PON3Q15166 354 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 KLHL22Q53GT1 634 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 LINC01590Q5TEZ4 76 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 FAM205BPQ63HN1 556 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 ZNF324BQ6AW86 544 aaPredicted RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 SHFQ7M4L6 423 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 PRSS48Q7RTY5 328 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 OR6V1Q8N148 313 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 STX19Q8N4C7 294 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 OR52I1Q8NGK6 324 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 OR6X1Q8NH79 312 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 MYDGFQ969H8 173 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 SARAFQ96BY9 339 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 GPR137Q96N19 417 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 MRPL13Q9BYD1 178 aaKnown RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 CCDC90BQ9GZT6 254 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 NUAK2Q9H093 628 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 B9D1Q9UPM9 204 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 FLVCR1Q9Y5Y0 555 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 SPENQ96T58 3664 aaKnown RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 NCOA6Q14686 2063 aaPredicted RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 SLC22A31A6NKX4 558 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 FAM171A2A8MVW0 826 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 M0R3G1 203 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 MRPS14O60783 128 aaKnown RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 AQP8O94778 261 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 GLCEO94923 617 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 TFAP2AP05549 437 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 PGA4P0DJD7 388 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 PGA3P0DJD8 388 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 PCMT1P22061 227 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 NTF4P34130 210 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 TUBA4AP68366 448 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 RAB40BQ12829 278 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 SLC35D3Q5M8T2 416 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 C19orf48Q6RUI8 117 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 FAM180AQ6UWF9 173 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 FGD2Q7Z6J4 655 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 ZBTB46Q86UZ6 589 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 SYT14Q8NB59 555 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 OR4F15Q8NGB8 312 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 OR51G2Q8NGK0 314 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 FNDC9Q8TBE3 224 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 RNF128Q8TEB7 428 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 ABHD3Q8WU67 409 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 SLC25A44Q96H78 314 aaPredicted RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 TMEM80Q96HE8 168 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 ADAD1Q96M93 576 aaKnown RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 FGF20Q9NP95 211 aaPredicted RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 HAO2Q9NYQ3 351 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 MCTS1Q9ULC4 181 aaKnown RBP9.04□□□□□ -0.96
SMG1-208ENST00000563448 FKBP7Q9Y680 259 aa9.04□□□□□ -0.96
SMG1-208ENST00000563448 IGKV1D-43A0A0B4J1Z2 117 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 ZNF726A6NNF4 738 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 J3QRE1 110 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 AHCYL1O43865 530 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 SLC16A7O60669 478 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 ZNF432O94892 652 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 CLPTM1O96005 669 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 CTLA4P16410 223 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 MAP2K4P45985 399 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 EMX1Q04741 257 aaPredicted RBP9.03□□□□□ -0.96
SMG1-208ENST00000563448 FMODQ06828 376 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 LGALS3BPQ08380 585 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 IRF3Q14653 427 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 ETFDHQ16134 617 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 HIST3H3Q16695 136 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 CARD17Q5XLA6 110 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 LYPD4Q6UWN0 246 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 CHMP1BQ7LBR1 199 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 ADGRE4PQ86SQ3 457 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms