RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NAA11Q9BSU3 229 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-214ENST00000560402 AMBRA1Q9C0C7 1298 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 RIBC2Q9H4K1 309 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 PARPBPQ9NWS1 579 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 AMDHD2Q9Y303 409 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 LYVE1Q9Y5Y7 322 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 RTTNQ86VV8 2226 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 MXRA5Q9NR99 2828 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 LOC100130705A0A1B0GUX0 176 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 H7C417 338 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 ADAM11O75078 769 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 BCAS1O75363 584 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-214ENST00000560402 DIRAS1O95057 198 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 CD40P25942 277 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 OR1E2P47887 323 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 OR2B6P58173 313 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 SLC35A1P78382 337 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 H3F3AP84243 136 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 TGFBR3Q03167 851 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 PLAURQ03405 335 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 LARS2Q15031 903 aaKnown RBP11.91□□□□□ -0.5
SMAD3-214ENST00000560402 GABRA6Q16445 453 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 MICAQ29983 383 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 KDM4DQ6B0I6 523 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 FAHD1Q6P587 224 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 PODNL1Q6PEZ8 512 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 CASP12Q6UXS9 341 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 ADGRG3Q86Y34 549 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF440Q8IYI8 595 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 OFCC1Q8IZS5 231 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 MUC15Q8N387 334 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 MUS81Q96NY9 551 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 MBOAT4Q96T53 435 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 CACNG6Q9BXT2 260 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 OR11A1Q9GZK7 315 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 SLC38A1Q9H2H9 487 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 HEATR1Q9H583 2144 aaKnown RBP11.91□□□□□ -0.5
SMAD3-214ENST00000560402 PAPOLBQ9NRJ5 636 aaKnown RBP11.91□□□□□ -0.5
SMAD3-214ENST00000560402 GDF2Q9UK05 429 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-214ENST00000560402 B3GALT5Q9Y2C3 310 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 GMPPBQ9Y5P6 360 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 FLVCR1Q9Y5Y0 555 aa11.91□□□□□ -0.5
SMAD3-214ENST00000560402 TMED7-TICAM2A0A0A6YYA0 188 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 AGAP5A6NIR3 686 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 E7EQL1 145 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 SSX4O60224 188 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 NDUFS7O75251 213 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 IGHV3-9P01782 118 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 H1F0P07305 194 aaKnown RBP11.9□□□□□ -0.5
SMAD3-214ENST00000560402 ITGA5P08648 1049 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 GNAO1P09471 354 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 CSF3P09919 207 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 BMP4P12644 408 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 SLC25A16P16260 332 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 RPS4Y1P22090 263 aaKnown RBP11.9□□□□□ -0.5
SMAD3-214ENST00000560402 PRKACGP22612 351 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 PRKAR1BP31321 381 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 IFNGR2P38484 337 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 SLC1A3P43003 542 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 IDH2P48735 452 aaKnown RBP11.9□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF83P51522 516 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 CHRNEQ04844 493 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 APOFQ13790 326 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 LIN52Q52LA3 116 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF311Q5JNZ3 666 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 FGD3Q5JSP0 725 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 PAQR6Q6TCH4 344 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 DEF8Q6ZN54 512 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 ABHD12BQ7Z5M8 362 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-214ENST00000560402 TMEM179BQ7Z7N9 219 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 HS3ST5Q8IZT8 346 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 HDAC2Q92769 488 aaKnown RBP11.9□□□□□ -0.5
SMAD3-214ENST00000560402 TMEM45BQ96B21 275 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 FNDC11Q9BVV2 318 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 MTHFD2LQ9H903 347 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-214ENST00000560402 FKRPQ9H9S5 495 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 VNN3Q9NY84 501 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 UPB1Q9UBR1 384 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 TMED7Q9Y3B3 224 aa11.9□□□□□ -0.5
SMAD3-214ENST00000560402 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 A0A096LNT2 108 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 PRAMEF27A3QJZ7 478 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 ELOA3DA6NLF2 546 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 CLDN24A6NM45 220 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 A8MV72 311 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 M0R1B8 84 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 DBIP07108 87 aaKnown RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 CHRM4P08173 479 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 SMIM18P0DKX4 95 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 PAX7P23759 505 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 EEF1B2P24534 225 aaKnown RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 DAPP51397 102 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 HMGA2P52926 109 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 UGT2B15P54855 530 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 GABARAPL2P60520 117 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 CSNK2BP67870 215 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 IL5RAQ01344 420 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 SPOCK1Q08629 439 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms