RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 KRTAP4-16G5E9R7 235 aaPredicted RBP3.07□□□□□ -1.92
CASC4-206ENST00000558847 SIRPB1O00241 398 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 NDUFAB1O14561 156 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 CACNG3O60359 315 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 NPIPB7O75200 414 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 FGFR1OPO95684 399 aaKnown RBP3.07□□□□□ -1.92
CASC4-206ENST00000558847 IGHV4-34P06331 123 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 CSF3P09919 207 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 CD1EP15812 388 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 AK4P27144 223 aaPredicted RBP3.07□□□□□ -1.92
CASC4-206ENST00000558847 NSG1P42857 185 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 ZNF92Q03936 586 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 PSG7Q13046 419 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 PRPSAP1Q14558 356 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 RFX4Q33E94 735 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 CTRB2Q6GPI1 263 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 CNIH2Q6PI25 160 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 C19orf35Q6ZS72 473 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 RFLNAQ6ZTI6 216 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 EIF3MQ7L2H7 374 aaKnown RBP3.07□□□□□ -1.92
CASC4-206ENST00000558847 SCD5Q86SK9 330 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 PUSL1Q8N0Z8 303 aaKnown RBP3.07□□□□□ -1.92
CASC4-206ENST00000558847 FAM71E2Q8N5Q1 922 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 MS4A15Q8N5U1 240 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 BLOC1S5Q8TDH9 187 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 ACMSDQ8TDX5 336 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 SDR42E1Q8WUS8 393 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 GSDMAQ96QA5 445 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 ATP5SQ99766 215 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 EML4Q9HC35 981 aaKnown RBP3.07□□□□□ -1.92
CASC4-206ENST00000558847 CCL28Q9NRJ3 127 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 GPATCH2LQ9NWQ4 482 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 ZNF225Q9UK10 706 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 PDS5BQ9NTI5 1447 aa3.07□□□□□ -1.92
CASC4-206ENST00000558847 TRAV39A0A0B4J263 110 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 LRRIQ4A6NIV6 560 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 PEX7O00628 323 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 RAB29O14966 203 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 KLHL41O60662 606 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 OR2J3O76001 311 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 INSP01308 110 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CT62P0C5K7 136 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 SMIM10L1P0DMW3 83 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CALM1P0DP23 149 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CALM2P0DP24 149 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CALM3P0DP25 149 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 RBMXP38159 391 aaKnown RBP3.06□□□□□ -1.92
CASC4-206ENST00000558847 SLC1A1P43005 524 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 RAB9AP51151 201 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CCR8P51685 355 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 MSH6P52701 1360 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 GNB2P62879 340 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 ECH1Q13011 328 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CLINT1Q14677 625 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CHRNA6Q15825 494 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 TTC23LQ6PF05 361 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 SASS6Q6UVJ0 657 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 IL34Q6ZMJ4 242 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 TMEM179Q6ZVK1 233 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 NIPA1Q7RTP0 329 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 SLC16A14Q7RTX9 510 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 RALGPS2Q86X27 583 aaPredicted RBP3.06□□□□□ -1.92
CASC4-206ENST00000558847 TMEM61Q8N0U2 210 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 IQCKQ8N0W5 287 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 ZADH2Q8N4Q0 377 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 SUMF2Q8NBJ7 301 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 CCDC148Q8NFR7 591 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 OR4F15Q8NGB8 312 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 OR4A4PQ8NGN8 299 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 RPUSD4Q96CM3 377 aaKnown RBP3.06□□□□□ -1.92
CASC4-206ENST00000558847 PIK3IP1Q96FE7 263 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 SMIM10Q96HG1 83 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 FAM210BQ96KR6 192 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 RARRES2Q99969 163 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 C11orf70Q9BRQ4 267 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 AUNIPQ9H7T9 357 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 LYARQ9NX58 379 aaKnown RBP3.06□□□□□ -1.92
CASC4-206ENST00000558847 RABL2AQ9UBK7 228 aaPredicted RBP3.06□□□□□ -1.92
CASC4-206ENST00000558847 GOLT1BQ9Y3E0 138 aa3.06□□□□□ -1.92
CASC4-206ENST00000558847 SMCO2A6NFE2 343 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 ERVV-1B6SEH8 477 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 H0Y9J4 135 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 H0YIV9 168 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 DNALI1O14645 258 aaPredicted RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 PPP1R2P9O14990 202 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 MRPS12O15235 138 aaKnown RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 DFNA5O60443 496 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 OR2F2O95006 317 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 FGGP02679 453 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 ANXA8P13928 327 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 ELK1P19419 428 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 SERPINB5P36952 375 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 ATP5OP48047 213 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 CX3CR1P49238 355 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 TMED10P49755 219 aaKnown RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 NDPQ00604 133 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 GBE1Q04446 702 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 ZBED5Q49AG3 693 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 VAX1Q5SQQ9 334 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms