RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MESTQ5EB52 335 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 PARP8Q8N3A8 854 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 ARIH2OSQ8N7S6 290 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 TEX47Q8TBZ9 253 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF566Q969W8 418 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 NDEL1Q9GZM8 345 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 FOXD3Q9UJU5 478 aaPredicted RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 M0R3G1 203 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 ARHGEF9O43307 516 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 SLC43A1O75387 559 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 ACADSP16219 412 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 AGAP20933 346 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 GRNP28799 593 aaKnown RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 FAPQ12884 760 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 SLC25A35Q3KQZ1 300 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 C9orf135Q5VTT2 229 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 FBXW9Q5XUX1 488 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 C20orf196Q8IYI0 205 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 SSC4DQ8WTU2 575 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 DNAJC9Q8WXX5 260 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF837Q96EG3 531 aaPredicted RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 ADAD1Q96M93 576 aaKnown RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 MRPL13Q9BYD1 178 aaKnown RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 USE1Q9NZ43 259 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 CLDN14O95500 239 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 ATP6V1G2O95670 118 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 HIST1H1CP16403 213 aaKnown RBP13.48□□□□□ -0.25
NEDD1-213ENST00000557644 NOS3P29474 1203 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 RPS6KA3P51812 740 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 MYBPC1Q00872 1141 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 KRR1Q13601 381 aaKnown RBP13.48□□□□□ -0.25
NEDD1-213ENST00000557644 ACSM5Q6NUN0 579 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 PTCHD4Q6ZW05 846 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 GABRG1Q8N1C3 465 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 GALNT4Q8N4A0 578 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 OR2T33Q8NG76 320 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 OR6N1Q8NGY5 312 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 KCNJ16Q9NPI9 418 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 UPB1Q9UBR1 384 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 MALT1Q9UDY8 824 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 CACNA1CQ13936 2221 aa13.48□□□□□ -0.25
NEDD1-213ENST00000557644 CASQ2O14958 399 aaPredicted RBP13.47□□□□□ -0.25
NEDD1-213ENST00000557644 ARPC3O15145 178 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 KRT33AO76009 404 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 IGHG1P01857 330 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 CDKN2AP42771 156 aaKnown RBP13.47□□□□□ -0.25
NEDD1-213ENST00000557644 GIPRP48546 466 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 CRISP1P54107 249 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 TFF3Q07654 80 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 GINS1Q14691 196 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 TSC22D1Q15714 1073 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 ZIK1Q3SY52 487 aaPredicted RBP13.47□□□□□ -0.25
NEDD1-213ENST00000557644 Q6ZT83 130 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 LNX2Q8N448 690 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 OR4K13Q8NH42 304 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 NRG4Q8WWG1 115 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 KCNK17Q96T54 332 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 RBM24Q9BX46 236 aaKnown RBP13.47□□□□□ -0.25
NEDD1-213ENST00000557644 RIBC2Q9H4K1 309 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 SLC2A10O95528 541 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 TXNDC12O95881 172 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 APEHP13798 732 aaKnown RBP13.47□□□□□ -0.25
NEDD1-213ENST00000557644 CSNK1A1P48729 337 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 ASCL1P50553 236 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 CLRN1P58418 232 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 FMODQ06828 376 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 RIPK1Q13546 671 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 PTGES3Q15185 160 aaKnown RBP13.47□□□□□ -0.25
NEDD1-213ENST00000557644 PGGHGQ32M88 737 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 OGFRL1Q5TC84 451 aaPredicted RBP13.47□□□□□ -0.25
NEDD1-213ENST00000557644 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 SLC27A4Q6P1M0 643 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 LRFN4Q6PJG9 635 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 BEND4Q6ZU67 534 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 POMGNT2Q8NAT1 580 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 NOXO1Q8NFA2 376 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 NMNAT3Q96T66 252 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 CRLF2Q9HC73 371 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 ASB6Q9NWX5 421 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 GLTPQ9NZD2 209 aa13.47□□□□□ -0.25
NEDD1-213ENST00000557644 IGKV1D-43A0A0B4J1Z2 117 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 CDH2P19022 906 aaPredicted RBP13.46□□□□□ -0.25
NEDD1-213ENST00000557644 IGHV1-2P23083 117 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 ESRRGP62508 458 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 CDK5Q00535 292 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 CD47Q08722 323 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 HIST3H3Q16695 136 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF362Q5T0B9 420 aaPredicted RBP13.46□□□□□ -0.25
NEDD1-213ENST00000557644 CXorf67Q86X51 503 aaPredicted RBP13.46□□□□□ -0.25
NEDD1-213ENST00000557644 GPR137CQ8N3F9 429 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 SDR9C7Q8NEX9 313 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 OR52E2Q8NGJ4 325 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 TMEM54Q969K7 222 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 XKRYO14609 159 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 LYZL6O75951 148 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 SNAP29O95721 258 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 ITGA5P08648 1049 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms