RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SYNPRQ8TBG9 265 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 SNX33Q8WV41 574 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 VPS33AQ96AX1 596 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 C1QTNF5Q9BXJ0 243 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 ASPNQ9BXN1 380 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 OR51B6Q9H340 312 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 THUMPD1Q9NXG2 353 aaKnown RBP10.48□□□□□ -0.73
SNX6-209ENST00000557265 WIPI2Q9Y4P8 454 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 CACNG2Q9Y698 323 aa10.48□□□□□ -0.73
SNX6-209ENST00000557265 SLC22A23A1A5C7 686 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 CLDN25C9JDP6 229 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 SDHDO14521 159 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 BIRC5O15392 142 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 TPD52L2O43399 206 aaKnown RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 SERPINI2O75830 405 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 LCKP06239 509 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 ZCCHC18P0CG32 403 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 CCL2P13500 99 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 ZNF250P15622 560 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 GATA3P23771 443 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 CSNK1A1P48729 337 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 ERVS71-1P61550 626 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 PUDPQ08623 228 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 PDCD4Q53EL6 469 aaKnown RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 ULK3Q6PHR2 472 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 USP51Q70EK9 711 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 PIWIL3Q7Z3Z3 882 aaKnown RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 KIRREL3Q8IZU9 778 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 SIGLECL1Q8N7X8 197 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 GLB1L3Q8NCI6 653 aaPredicted RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 SLC30A7Q8NEW0 376 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 DNAJA4Q8WW22 397 aaPredicted RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 C11orf40Q8WZ69 217 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 GTF3AQ92664 365 aaKnown RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 DVL3Q92997 716 aaPredicted RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 MAL2Q969L2 176 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 TIMD4Q96H15 378 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 RSPO3Q9BXY4 272 aaPredicted RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 ROPN1BQ9BZX4 212 aaPredicted RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 ROPN1Q9HAT0 212 aaPredicted RBP10.47□□□□□ -0.73
SNX6-209ENST00000557265 BCL2L10Q9HD36 194 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 DECR2Q9NUI1 292 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 SLCO1C1Q9NYB5 712 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 NKIRAS2Q9NYR9 191 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 HAO1Q9UJM8 370 aa10.47□□□□□ -0.73
SNX6-209ENST00000557265 IGLV3-9A0A075B6K5 115 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 LRRN3E7EW58 273 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 PLPP3O14495 311 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 ZNF500O60304 480 aaPredicted RBP10.46□□□□□ -0.73
SNX6-209ENST00000557265 SLC22A3O75751 556 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 FSHBP01225 129 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 BGLAPP02818 100 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 BGNP21810 368 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 AHCYP23526 432 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 EPHA3P29320 983 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 LCN2P80188 198 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 RBBP4Q09028 425 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 STX3Q13277 289 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 TSTQ16762 297 aaKnown RBP10.46□□□□□ -0.73
SNX6-209ENST00000557265 HFEQ30201 348 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 WDR88Q6ZMY6 472 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 PXKQ7Z7A4 578 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 COMTD1Q86VU5 262 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 TREML1Q86YW5 311 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 SLC22A24Q8N4F4 322 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 C10orf53Q8N6V4 93 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 SCAIQ8N9R8 606 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 OR6S1Q8NH40 331 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 BBS10Q8TAM1 723 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 ZNF519Q8TB69 540 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.46□□□□□ -0.731e-6■■■■■ 50.8
SNX6-209ENST00000557265 RAB1CQ92928 201 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 LRRC58Q96CX6 371 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 SLC47A1Q96FL8 570 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 MOGAT1Q96PD6 335 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 DUX5Q96PT3 197 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 EPYCQ99645 322 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 SH3GL3Q99963 347 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 GAL3ST1Q99999 423 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 WDR55Q9H6Y2 383 aaPredicted RBP10.46□□□□□ -0.73
SNX6-209ENST00000557265 UNKLQ9H9P5 680 aaKnown RBP10.46□□□□□ -0.73
SNX6-209ENST00000557265 CDH20Q9HBT6 801 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 A4GALTQ9NPC4 353 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 MRPL39Q9NYK5 338 aaKnown RBP10.46□□□□□ -0.73
SNX6-209ENST00000557265 SELENONQ9NZV5 590 aa10.46□□□□□ -0.73
SNX6-209ENST00000557265 C5orf58C9J3I9 102 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 OR8G3PP0DMU2 310 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 PRTN3P24158 256 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 PRKAR1BP31321 381 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 UCP2P55851 309 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 BIDP55957 195 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 GLO1Q04760 184 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 RGNQ15493 299 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 MIDNQ504T8 468 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 C6orf10Q5SRN2 563 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 FAM91A1Q658Y4 838 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 LRFN4Q6PJG9 635 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 ICA1LQ8NDH6 482 aa10.45□□□□□ -0.74
SNX6-209ENST00000557265 CCL17Q92583 94 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms