RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 NSUN5P2Q63ZY6 315 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 ZNF585AQ6P3V2 769 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 CYB561A3Q8NBI2 242 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 NOXO1Q8NFA2 376 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 BPIFB6Q8NFQ5 453 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 OR5M9Q8NGP3 310 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 ABHD3Q8WU67 409 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 IPCEF1Q8WWN9 437 aaPredicted RBP12.78□□□□□ -0.36
SHOX2-206ENST00000554685 TXNDC15Q96J42 360 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 KCNK17Q96T54 332 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
SHOX2-206ENST00000554685 WARS2Q9UGM6 360 aaKnown RBP12.78□□□□□ -0.36
SHOX2-206ENST00000554685 NOSIPQ9Y314 301 aaKnown RBP12.78□□□□□ -0.36
SHOX2-206ENST00000554685 FKBP7Q9Y680 259 aa12.78□□□□□ -0.36
SHOX2-206ENST00000554685 SLC22A23A1A5C7 686 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 MAGEA13PA6NCF6 341 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 OR6C68A6NDL8 312 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 FAM183AA6NL82 134 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 WISP2O76076 250 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 AQP8O94778 261 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 YES1P07947 543 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 PGA4P0DJD7 388 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 PGA3P0DJD8 388 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 CRHBPP24387 322 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
SHOX2-206ENST00000554685 POU4F2Q12837 409 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 KLHL12Q53G59 568 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 THEM4Q5T1C6 240 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 MEPCEQ7L2J0 689 aaKnown RBP12.77□□□□□ -0.37
SHOX2-206ENST00000554685 AAED1Q7RTV5 226 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 FGD2Q7Z6J4 655 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 CD163Q86VB7 1156 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 ZIC4Q8N9L1 334 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF540Q8NDQ6 660 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 PTP4A1Q93096 173 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 GMPPAQ96IJ6 420 aaPredicted RBP12.77□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF385AQ96PM9 386 aaKnown RBP12.77□□□□□ -0.37
SHOX2-206ENST00000554685 OR2M2Q96R28 347 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 DDOQ99489 341 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 EMC6Q9BV81 110 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 MRPL13Q9BYD1 178 aaKnown RBP12.77□□□□□ -0.37
SHOX2-206ENST00000554685 NMNAT2Q9BZQ4 307 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 SYT4Q9H2B2 425 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 OR51V1Q9H2C8 321 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 TP63Q9H3D4 680 aaPredicted RBP12.77□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF696Q9H7X3 374 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 B3GAT2Q9NPZ5 323 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 RPRD1BQ9NQG5 326 aaKnown RBP12.77□□□□□ -0.37
SHOX2-206ENST00000554685 ASB6Q9NWX5 421 aa12.77□□□□□ -0.37
SHOX2-206ENST00000554685 H7C1C5 153 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 MRPS14O60783 128 aaKnown RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 SS18L1O75177 396 aaPredicted RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 MRPL33O75394 65 aaKnown RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 KHDRBS3O75525 346 aaKnown RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 GLCEO94923 617 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 DBTP11182 482 aaKnown RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 PIPP12273 146 aaPredicted RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 SPI1P17947 270 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 EEF1B2P24534 225 aaKnown RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 MTNR1AP48039 350 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 CSNK1A1P48729 337 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 LCN6P62502 163 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF91Q05481 1191 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 CAMK2DQ13557 499 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 APOFQ13790 326 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 SMN1Q16637 294 aaKnown RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 KLHL22Q53GT1 634 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 PRR30Q53SZ7 412 aaPredicted RBP12.76□□□□□ -0.37
SHOX2-206ENST00000554685 C1orf185Q5T7R7 199 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 LAIR2Q6ISS4 152 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 PROKR2Q8NFJ6 384 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 OR9Q1Q8NGQ5 310 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 OR6N1Q8NGY5 312 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 CPT1CQ8TCG5 803 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 MYDGFQ969H8 173 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 ZFP3Q96NJ6 502 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 RACGAP1Q9H0H5 632 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 MED20Q9H944 212 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 HAO2Q9NYQ3 351 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 AASSQ9UDR5 926 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 PSORS1C1Q9UIG5 152 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 EMC9Q9Y3B6 208 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 PCDHGB5Q9Y5G0 923 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 PCDHGB1Q9Y5G3 927 aa12.76□□□□□ -0.37
SHOX2-206ENST00000554685 MBD3L4A6NDZ8 208 aaPredicted RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 MBD3L3A6NE82 208 aaPredicted RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 MBD3L5A6NJ08 208 aaPredicted RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 ATXN7O15265 892 aaPredicted RBP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 SLC16A7O60669 478 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 SMNDC1O75940 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
SHOX2-206ENST00000554685 ZNF432O94892 652 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 TGM6O95932 706 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 CRHP06850 196 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 LYNP07948 512 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 SLC2A5P22732 501 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 ATP6V1E1P36543 226 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 NUDT6P53370 316 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 CASP6P55212 293 aa12.75□□□□□ -0.37
SHOX2-206ENST00000554685 RUNX1T1Q06455 604 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms