RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 USF3Q68DE3 2245 aa17.76■□□□□ 0.43
FOXA1-203ENST00000553751 ACANP16112 2415 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 A0A1W2PRQ8 180 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 NPIPB13A6NJU9 1138 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 NPIPB4C9JG80 1138 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 E7EQL1 145 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 IGKV3-15P01624 115 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 IGLV1-44P01699 117 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 IGHG1P01857 330 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 H1F0P07305 194 aaKnown RBP17.75■□□□□ 0.43
FOXA1-203ENST00000553751 SAGP10523 405 aaPredicted RBP17.75■□□□□ 0.43
FOXA1-203ENST00000553751 B4GALT1P15291 398 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 PAX1P15863 534 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 PTH2RP49190 550 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 DAP3P51398 398 aaKnown RBP17.75■□□□□ 0.43
FOXA1-203ENST00000553751 RUNX1T1Q06455 604 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 DGCR6Q14129 220 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 LAPTM4AQ15012 233 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 RINLQ6ZS11 566 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 FAM169BQ8N8A8 192 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 NOXO1Q8NFA2 376 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 PERPQ96FX8 193 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 DHRS1Q96LJ7 313 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 SEPHS2Q99611 448 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 FOXB1Q99853 325 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 CXorf56Q9H5V9 222 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 MOV10Q9HCE1 1003 aaKnown RBP17.75■□□□□ 0.43
FOXA1-203ENST00000553751 ZNF701Q9NV72 531 aaPredicted RBP17.75■□□□□ 0.43
FOXA1-203ENST00000553751 FAM32AQ9Y421 112 aaKnown RBP17.75■□□□□ 0.43
FOXA1-203ENST00000553751 MTORP42345 2549 aa17.75■□□□□ 0.43
FOXA1-203ENST00000553751 MED13LQ71F56 2210 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 TRAV27A0A087WT01 109 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 EFCAB9A8MZ26 197 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 MCIDASD6RGH6 385 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 ATP6V1G2-DDX39BF2Z307 99 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 DIRAS1O95057 198 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 HIST3H3Q16695 136 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 C3orf36Q3SXR2 165 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 ALG10Q5BKT4 473 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 Q5PR19 223 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 ARMC4Q5T2S8 1044 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 PODNL1Q6PEZ8 512 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 LRFN4Q6PJG9 635 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 ZNF813Q6ZN06 617 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 DTX2Q86UW9 622 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 CCDC36Q8IYA8 594 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 LRRC75AQ8NAA5 344 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 OR13C2Q8NGS9 318 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 BCAS4Q8TDM0 211 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 TMUB1Q9BVT8 246 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 MRPL13Q9BYD1 178 aaKnown RBP17.74■□□□□ 0.43
FOXA1-203ENST00000553751 SEC61A2Q9H9S3 476 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 POU2F3Q9UKI9 436 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 POFUT2Q9Y2G5 429 aa17.74■□□□□ 0.43
FOXA1-203ENST00000553751 TRBV4-1A0A0J9YWV2 114 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 CENPBD1B2RD01 187 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 OVOL3O00110 214 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 CDC42EP2O14613 210 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 CD8AP01732 235 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 CECR9P0C854 216 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 CBR1P16152 277 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 ATP6V1B2P21281 511 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 GPR4P46093 362 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 SLC9A3P48764 834 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 FGD3Q5JSP0 725 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 SHEQ5VZ18 495 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 TMPRSS11FQ6ZWK6 438 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 HDDC2Q7Z4H3 204 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 MDP1Q86V88 176 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 MYPOPQ86VE0 399 aaPredicted RBP17.73■□□□□ 0.43
FOXA1-203ENST00000553751 ARHGAP24Q8N264 748 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 DEPDC4Q8N2C3 294 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 OR51A7Q8NH64 312 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 ZNF347Q96SE7 839 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 DHRS9Q9BPW9 319 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 FUZQ9BT04 418 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 TRAF4Q9BUZ4 470 aaPredicted RBP17.73■□□□□ 0.43
FOXA1-203ENST00000553751 KATNB1Q9BVA0 655 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 TXNIPQ9H3M7 391 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 NOX3Q9HBY0 568 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 FAIMQ9NVQ4 179 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 B3GNT2Q9NY97 397 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 ZNF224Q9NZL3 707 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 MOKQ9UQ07 419 aa17.73■□□□□ 0.43
FOXA1-203ENST00000553751 TRMUO75648 421 aaKnown RBP17.72■□□□□ 0.43
FOXA1-203ENST00000553751 IGHMP01871 453 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 HLA-HP01893 362 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 CELA3BP08861 270 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 ACADSP16219 412 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 ITGA2P17301 1181 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 CAPZA2P47755 286 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 CLRN1P58418 232 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 SEC23BQ15437 767 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 ANKDD1AQ495B1 522 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 OAFQ86UD1 273 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 CDK20Q8IZL9 346 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 TNFRSF13CQ96RJ3 184 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 GRIP2Q9C0E4 1043 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 ACTR3BQ9P1U1 418 aa17.72■□□□□ 0.43
FOXA1-203ENST00000553751 TMEM5Q9Y2B1 443 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms