RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 FMO3P31513 532 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 CAMK2DQ13557 499 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 AADACL4Q5VUY2 407 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 UGT2A3Q6UWM9 527 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 RPTNQ6XPR3 784 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 TUSC5Q8IXB3 177 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 ZNF786Q8N393 782 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 PTP4A1Q93096 173 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 ZNF582Q96NG8 517 aaPredicted RBP25.55■■□□□ 1.68
BRF1-213ENST00000548421 ALG12Q9BV10 488 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 MED20Q9H944 212 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 GLRX2Q9NS18 164 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 DOCK7Q96N67 2140 aa25.55■■□□□ 1.68
BRF1-213ENST00000548421 SH3D21A4FU49 640 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 CENPBD1B2RD01 187 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 SLC19A2O60779 497 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 YES1P07947 543 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 HOXD4P09016 255 aaPredicted RBP25.54■■□□□ 1.68
BRF1-213ENST00000548421 PGA4P0DJD7 388 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 PGA3P0DJD8 388 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 C1orf185Q5T7R7 199 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 NIPAL3Q6P499 406 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 GID4Q8IVV7 300 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 SYT14Q8NB59 555 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 NOXO1Q8NFA2 376 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 OR2M2Q96R28 347 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 HCAR1Q9BXC0 346 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 MRPL13Q9BYD1 178 aaKnown RBP25.54■■□□□ 1.68
BRF1-213ENST00000548421 NMNAT2Q9BZQ4 307 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 SYT4Q9H2B2 425 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 RPRD1BQ9NQG5 326 aaKnown RBP25.54■■□□□ 1.68
BRF1-213ENST00000548421 H2AFY2Q9P0M6 372 aaPredicted RBP25.54■■□□□ 1.68
BRF1-213ENST00000548421 CLEC4AQ9UMR7 237 aa25.54■■□□□ 1.68
BRF1-213ENST00000548421 SLC22A23A1A5C7 686 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 PRODHO43272 600 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 ZNF432O94892 652 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 SLC25A1P53007 311 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 CLRN1P58418 232 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 CXCR4P61073 352 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 SMN1Q16637 294 aaKnown RBP25.53■■□□□ 1.68
BRF1-213ENST00000548421 AAED1Q7RTV5 226 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 BBS1Q8NFJ9 593 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 OR9Q1Q8NGQ5 310 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 RFKQ969G6 155 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 GMPPAQ96IJ6 420 aaPredicted RBP25.53■■□□□ 1.68
BRF1-213ENST00000548421 TP63Q9H3D4 680 aaPredicted RBP25.53■■□□□ 1.68
BRF1-213ENST00000548421 NOSIPQ9Y314 301 aaKnown RBP25.53■■□□□ 1.68
BRF1-213ENST00000548421 SNTNA6NMZ2 147 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 SELENOPP49908 381 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 CARD17Q5XLA6 110 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 RTL6Q6ICC9 239 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 OR2A2Q6IF42 318 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 TMEM123Q8N131 208 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 ST6GALNAC3Q8NDV1 305 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 TM9SF2Q99805 663 aa25.53■■□□□ 1.68
BRF1-213ENST00000548421 KALRNO60229 2985 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 SLC1A7O00341 560 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 NTF4P34130 210 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 CDH11P55287 796 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 C9orf106Q8NAJ2 232 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 BPIFB6Q8NFQ5 453 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 FNDC8Q8TC99 324 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 NR1H4Q96RI1 486 aaPredicted RBP25.52■■□□□ 1.68
BRF1-213ENST00000548421 OR51V1Q9H2C8 321 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 PARPBPQ9NWS1 579 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.52■■□□□ 1.68
BRF1-213ENST00000548421 FAM215AQ9Y5M1 114 aa25.52■■□□□ 1.68
BRF1-213ENST00000548421 MBD3L4A6NDZ8 208 aaPredicted RBP25.51■■□□□ 1.67
BRF1-213ENST00000548421 MBD3L3A6NE82 208 aaPredicted RBP25.51■■□□□ 1.67
BRF1-213ENST00000548421 MBD3L5A6NJ08 208 aaPredicted RBP25.51■■□□□ 1.67
BRF1-213ENST00000548421 SS18L1O75177 396 aaPredicted RBP25.51■■□□□ 1.67
BRF1-213ENST00000548421 MRPL33O75394 65 aaKnown RBP25.51■■□□□ 1.67
BRF1-213ENST00000548421 GYPBP06028 91 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 CLUP10909 449 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 NR2C1P13056 603 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 SPI1P17947 270 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 SLC2A5P22732 501 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 CHN2P52757 468 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 NUDT6P53370 316 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 CSNK2BP67870 215 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 KLHL12Q53G59 568 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 RBM48Q5RL73 367 aaKnown RBP25.51■■□□□ 1.67
BRF1-213ENST00000548421 DOLPP1Q86YN1 238 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 OR2T4Q8NH00 348 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 MBD3L2Q8NHZ7 208 aaPredicted RBP25.51■■□□□ 1.67
BRF1-213ENST00000548421 RBP7Q96R05 134 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 ASB6Q9NWX5 421 aa25.51■■□□□ 1.67
BRF1-213ENST00000548421 RP1L1Q8IWN7 2480 aaPredicted RBP25.5■■□□□ 1.67
BRF1-213ENST00000548421 SLC43A1O75387 559 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 CCDC159P0C7I6 412 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 AGTR1P30556 359 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 CSNK1A1P48729 337 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 LGALS3BPQ08380 585 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 APOFQ13790 326 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 HIST3H3Q16695 136 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 THEM4Q5T1C6 240 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 MEPCEQ7L2J0 689 aaKnown RBP25.5■■□□□ 1.67
BRF1-213ENST00000548421 OR6V1Q8N148 313 aa25.5■■□□□ 1.67
BRF1-213ENST00000548421 INTS12Q96CB8 462 aaKnown RBP25.5■■□□□ 1.67
BRF1-213ENST00000548421 TSSK2Q96PF2 358 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms