RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CD300AQ9UGN4 299 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 ADAM21Q9UKJ8 722 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 MOKQ9UQ07 419 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 EFCAB9A8MZ26 197 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 B2RBV5 119 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 CENPBD1B2RD01 187 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 ATP6V1G2-DDX39BF2Z307 99 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 OVOL3O00110 214 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 PRSS23O95084 383 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 IGKV3-15P01624 115 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 IGLV1-44P01699 117 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 H1F0P07305 194 aaKnown RBP13.7□□□□□ -0.22
CCDC78-216ENST00000544996 TSPAN19P0C672 248 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 PGA4P0DJD7 388 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 PGA3P0DJD8 388 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 B4GALT1P15291 398 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 FOSL1P15407 271 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 TTKP33981 857 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 MSX2P35548 267 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-216ENST00000544996 SLC9A3P48764 834 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 LAPTM4AQ15012 233 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 ANKDD1AQ495B1 522 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 PIWIL3Q7Z3Z3 882 aaKnown RBP13.7□□□□□ -0.22
CCDC78-216ENST00000544996 OAFQ86UD1 273 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 DTX2Q86UW9 622 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 WDFY1Q8IWB7 410 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 MUC15Q8N387 334 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 MOSPD2Q8NHP6 518 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 PYURFQ96I23 114 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 TRAF4Q9BUZ4 470 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-216ENST00000544996 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 NDUFAF4Q9P032 175 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 TMEM5Q9Y2B1 443 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 HIF3AQ9Y2N7 669 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 PRR14LQ5THK1 2151 aa13.7□□□□□ -0.22
CCDC78-216ENST00000544996 RAI1Q7Z5J4 1906 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-216ENST00000544996 A0A087WUU8 490 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 A0A1W2PRQ8 180 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 NPIPB13A6NJU9 1138 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 NPIPB4C9JG80 1138 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 hCG_2039718K7EN88 272 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 ARPC2O15144 300 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 QDPRP09417 244 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 CECR9P0C854 216 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 CD79AP11912 226 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 BMP4P12644 408 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 NR2C1P13056 603 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 ACADSP16219 412 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 MAKP20794 623 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 FUT4P22083 530 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 CALB2P22676 271 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 IDH3GP51553 393 aaPredicted RBP13.69□□□□□ -0.22
CCDC78-216ENST00000544996 LSM11P83369 360 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC78-216ENST00000544996 NAAAQ02083 359 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 NPRL3Q12980 569 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 DGCR6Q14129 220 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 TAF11Q15544 211 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 GSG1Q2KHT4 349 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 LRFN4Q6PJG9 635 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 TBPL2Q6SJ96 375 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 B3GLCTQ6Y288 498 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 MDP1Q86V88 176 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 ARHGAP24Q8N264 748 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 FAM86B1Q8N7N1 296 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 IL17RDQ8NFM7 739 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 OR51A7Q8NH64 312 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 ASB10Q8WXI3 467 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 C7orf34Q96L11 122 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 Q96MF0 132 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 NDEL1Q9GZM8 345 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 FAM53CQ9NYF3 392 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 V9GYQ6 96 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 F8P00451 2351 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 CELSR1Q9NYQ6 3014 aa13.69□□□□□ -0.22
CCDC78-216ENST00000544996 DHHO43323 396 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 FARS2O95363 451 aaKnown RBP13.68□□□□□ -0.22
CCDC78-216ENST00000544996 CD8AP01732 235 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 HLA-HP01893 362 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 OR8G3PP0DMU2 310 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 APOBEC3AP31941 199 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-216ENST00000544996 CDKN1AP38936 164 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 ZNF84P51523 738 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 SMIM11AP58511 58 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 CHRNB3Q05901 458 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 PIGFQ07326 219 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 ETFDHQ16134 617 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 TMPRSS11FQ6ZWK6 438 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 TSEN54Q7Z6J9 526 aaKnown RBP13.68□□□□□ -0.22
CCDC78-216ENST00000544996 MEX3DQ86XN8 651 aaKnown RBP13.68□□□□□ -0.22
CCDC78-216ENST00000544996 SYT14Q8NB59 555 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 NOXO1Q8NFA2 376 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 OR4F15Q8NGB8 312 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 SLC7A13Q8TCU3 470 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 MCHR2Q969V1 340 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 BDH2Q9BUT1 245 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 MRPL13Q9BYD1 178 aaKnown RBP13.68□□□□□ -0.22
CCDC78-216ENST00000544996 TXNIPQ9H3M7 391 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 DENND2DQ9H6A0 471 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms