RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 RAB39BQ96DA2 213 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 SLC47A1Q96FL8 570 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 EPYCQ99645 322 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 SLC6A7Q99884 636 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 ZNF747Q9BV97 191 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 ASPNQ9BXN1 380 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 ZNF696Q9H7X3 374 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 HINT3Q9NQE9 182 aaKnown RBP17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 NKIRAS2Q9NYR9 191 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 PKD1L1Q8TDX9 2849 aa17.03■□□□□ 0.32
LPCAT3-211ENST00000543794 IGLV3-9A0A075B6K5 115 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 SLC22A23A1A5C7 686 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 HDAC3O15379 428 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 ZNF250P15622 560 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 CRYBB2P43320 205 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 VSNL1P62760 191 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 CCL8P80075 99 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 PMS2P3Q13401 168 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 TMEM154Q6P9G4 183 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 COMTD1Q86VU5 262 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 ZIM2Q9NZV7 527 aa17.02■□□□□ 0.32
LPCAT3-211ENST00000543794 TRPC5OSA6NMA1 111 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 CLIC1O00299 241 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 PLPP3O14495 311 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 TMPRSS2O15393 492 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 ADRA2CP18825 462 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 CSNK1A1P48729 337 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 TEKQ02763 1124 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 FADDQ13158 208 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 C6orf10Q5SRN2 563 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 DHRS4L2Q6PKH6 230 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 WDR88Q6ZMY6 472 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 MIER2Q8N344 545 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 BPIFB2Q8N4F0 458 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 SLC22A24Q8N4F4 322 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 SYNPRQ8TBG9 265 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 AENQ8WTP8 325 aaKnown RBP17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 MOGAT1Q96PD6 335 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 TSPAN32Q96QS1 320 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 SDR39U1Q9NRG7 319 aaPredicted RBP17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 SLCO1C1Q9NYB5 712 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 PCDHGB1Q9Y5G3 927 aa17.01■□□□□ 0.31
LPCAT3-211ENST00000543794 WNK2Q9Y3S1 2297 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 A0A0B4J2E0 115 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 A0A1B0GX12 115 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 C5orf58C9J3I9 102 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 RGS16O15492 202 aaPredicted RBP17■□□□□ 0.31
LPCAT3-211ENST00000543794 TPST1O60507 370 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 IGHV2-5P01817 119 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 FAM157BP0CG42 384 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 AHCYP23526 432 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 GATA3P23771 443 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 KLF3P57682 345 aaPredicted RBP17■□□□□ 0.31
LPCAT3-211ENST00000543794 UBA52P62987 128 aaKnown RBP17■□□□□ 0.31
LPCAT3-211ENST00000543794 KRT71Q3SY84 523 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 DCAF12L2Q5VW00 463 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 SHISA2Q6UWI4 295 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 PAQR4Q8N4S7 273 aaPredicted RBP17■□□□□ 0.31
LPCAT3-211ENST00000543794 SLC30A7Q8NEW0 376 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 ZNF519Q8TB69 540 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 RNF217Q8TC41 542 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 GTF2H4Q92759 462 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 TMEM54Q969K7 222 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 PAIP1Q9H074 479 aaKnown RBP17■□□□□ 0.31
LPCAT3-211ENST00000543794 RAD21L1Q9H4I0 556 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 TMEM27Q9HBJ8 222 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 SELENONQ9NZV5 590 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 OPN4Q9UHM6 478 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 WIPI2Q9Y4P8 454 aa17■□□□□ 0.31
LPCAT3-211ENST00000543794 IGHV1-69-2A0A0G2JMI3 117 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 LRRN3E7EW58 273 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 FSHBP01225 129 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 OR8G3PP0DMU2 310 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 HKR1P10072 659 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 FPR2P25090 351 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 RAD52P43351 418 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 POLR2JP52435 117 aaKnown RBP16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 FOXL1Q12952 345 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 OR1Q1Q15612 314 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 NXNQ6DKJ4 435 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 SNX33Q8WV41 574 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 C11orf40Q8WZ69 217 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 MAELQ96JY0 434 aaKnown RBP16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 TMEM43Q9BTV4 400 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 C7orf69Q9H7B7 122 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 NTN4Q9HB63 628 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 DDX28Q9NUL7 540 aaKnown RBP16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 GLTPQ9NZD2 209 aa16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 TESQ9UGI8 421 aaKnown RBP16.99■□□□□ 0.31
LPCAT3-211ENST00000543794 TPST2O60704 377 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 ENTPD5O75356 428 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 SERPINI2O75830 405 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 PRSS23O95084 383 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 SNAP29O95721 258 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 CCL2P13500 99 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 BIDP55957 195 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 RBBP4Q09028 425 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 LRFN4Q6PJG9 635 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 C10orf53Q8N6V4 93 aa16.98■□□□□ 0.31
LPCAT3-211ENST00000543794 OR9I1Q8NGQ6 314 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms