RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 EIF4EP06730 217 aaKnown RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 PTGS2P35354 604 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 EGR3Q06889 387 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 SCN1BQ07699 218 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 MFSD13AQ14CX5 517 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 INPP5JQ15735 1006 aaPredicted RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 BTBD16Q32M84 506 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 PYDC2Q56P42 97 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 TMEM81Q6P7N7 255 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 DPY19L4Q7Z388 723 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 SYT9Q86SS6 491 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 ARMC10Q8N2F6 343 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 WDSUB1Q8N9V3 476 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 OR6N2Q8NGY6 317 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 OTOSQ8NHW6 89 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 ASB10Q8WXI3 467 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 RELTQ969Z4 430 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 TXNDC15Q96J42 360 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 ADAD1Q96M93 576 aaKnown RBP12.74□□□□□ -0.37
LDB3-207ENST00000542786 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 SLC39A1Q9NY26 324 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 VDAC3Q9Y277 283 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 ZNF281Q9Y2X9 895 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 ALPK2Q86TB3 2170 aa12.74□□□□□ -0.37
LDB3-207ENST00000542786 SPEGQ15772 3267 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 TRBV5-5A0A0J9YX44 114 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 OR4C45A6NMZ5 311 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 NOTOA8MTQ0 251 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 C9J4A7 227 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 ARL6IP5O75915 188 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 ATF1P18846 271 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 RAB3BP20337 219 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 NPR2P20594 1047 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 AHCYP23526 432 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 MAP2K6P52564 334 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 PUDPQ08623 228 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
LDB3-207ENST00000542786 MADCAM1Q13477 382 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 KIF26BQ2KJY2 2108 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 YIF1BQ5BJH7 314 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 FDX2Q6P4F2 183 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 H1FNTQ75WM6 255 aaPredicted RBP12.73□□□□□ -0.37
LDB3-207ENST00000542786 M1APQ8TC57 530 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 HAVCR2Q8TDQ0 301 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 DERL3Q96Q80 235 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 C11orf54Q9H0W9 315 aaPredicted RBP12.73□□□□□ -0.37
LDB3-207ENST00000542786 ARRDC1-AS1Q9H2J1 176 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 METTL7AQ9H8H3 244 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 SH2D2AQ9NP31 389 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 CHST11Q9NPF2 352 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 SDHAF3Q9NRP4 125 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 FRRS1LQ9P0K9 344 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 KLHL13Q9P2N7 655 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 MALT1Q9UDY8 824 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 KCNG2Q9UJ96 466 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 ING1Q9UK53 422 aaPredicted RBP12.73□□□□□ -0.37
LDB3-207ENST00000542786 FBXL2Q9UKC9 423 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 ADAM30Q9UKF2 790 aa12.73□□□□□ -0.37
LDB3-207ENST00000542786 A0A1W2PPK0 400 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 ZNF879B4DU55 563 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 TACSTD2P09758 323 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 EPXP11678 715 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 RPS27P42677 84 aaKnown RBP12.72□□□□□ -0.37
LDB3-207ENST00000542786 P2RY4P51582 365 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 FOXK1P85037 733 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 ALKBH1Q13686 389 aaKnown RBP12.72□□□□□ -0.37
LDB3-207ENST00000542786 MELKQ14680 651 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 OR7A5Q15622 319 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 TAB1Q15750 504 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 EXT1Q16394 746 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 PLA2G2CQ5R387 149 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 LRRC28Q86X40 367 aaPredicted RBP12.72□□□□□ -0.37
LDB3-207ENST00000542786 KDM8Q8N371 416 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 OR11G2Q8NGC1 345 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 OR4M1Q8NGD0 313 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 NXPE2Q96DL1 559 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 ITPKCQ96DU7 683 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 KCNJ15Q99712 375 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 TSPAN10Q9H1Z9 355 aaPredicted RBP12.72□□□□□ -0.37
LDB3-207ENST00000542786 NOX4Q9NPH5 578 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 ALKBH4Q9NXW9 302 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 SLCO1C1Q9NYB5 712 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 B3GAT1Q9P2W7 334 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 LAMP5Q9UJQ1 280 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 MYO15AQ9UKN7 3530 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 PMS2P1A4D2B8 440 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 HSPB2A8KAH6 182 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 SLC16A7O60669 478 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 ITGA10O75578 1167 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 OR6A2O95222 327 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 PAHP00439 452 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 APOA1P02647 267 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 KRT8P05787 483 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 CENPAP49450 140 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 C19orf57Q0VDD7 668 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 HSPB2Q16082 182 aa12.72□□□□□ -0.37
LDB3-207ENST00000542786 ETFDHQ16134 617 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms