RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 FGFBP3Q8TAT2 258 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 GTF3AQ92664 365 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 MAL2Q969L2 176 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 LRR1Q96L50 414 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ASPNQ9BXN1 380 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 DENND2DQ9H6A0 471 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 C7orf69Q9H7B7 122 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ZNF446Q9NWS9 450 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 GPR160Q9UJ42 338 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 FBXL3Q9UKT7 428 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 WIPI2Q9Y4P8 454 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 GPR45Q9Y5Y3 372 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ZNF726A6NNF4 738 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 CLDN25C9JDP6 229 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 SDHDO14521 159 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 SERPINA5P05154 406 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 LCKP06239 509 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 HKR1P10072 659 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 ARAFP10398 606 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 BGNP21810 368 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 FPR2P25090 351 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 EPHA3P29320 983 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 CRYBB2P43320 205 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 CSNK1A1P48729 337 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 SELENOVP59797 346 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 LCN2P80188 198 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 PUDPQ08623 228 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 RBBP4Q09028 425 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 FOXL1Q12952 345 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 PMS2P3Q13401 168 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 TSTQ16762 297 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 PCGF3Q3KNV8 242 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 USP51Q70EK9 711 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 HDXQ7Z353 690 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 NET1Q7Z628 596 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 COMTD1Q86VU5 262 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 SKA3Q8IX90 412 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 C10orf53Q8N6V4 93 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 SIGLECL1Q8N7X8 197 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 SLC30A7Q8NEW0 376 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 SYNPRQ8TBG9 265 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 MOGAT1Q96PD6 335 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 WDR55Q9H6Y2 383 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 C12orf10Q9HB07 376 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 DECR2Q9NUI1 292 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 OPN4Q9UHM6 478 aa11.93□□□□□ -0.5
SMARCA4-206ENST00000538456 LRRN3E7EW58 273 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 BIRC5O15392 142 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 BGLAPP02818 100 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 IL6P05231 212 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 AHCYP23526 432 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 TEKQ02763 1124 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 MIDNQ504T8 468 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 C6orf10Q5SRN2 563 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 TREML4Q6UXN2 200 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 RBMS3Q6XE24 437 aaKnown RBP11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 LSMEM1Q8N8F7 131 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 DNAJA4Q8WW22 397 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 SLC35B4Q969S0 331 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 SLC41A3Q96GZ6 507 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 TIMD4Q96H15 378 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 SH3GL3Q99963 347 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 GAL3ST1Q99999 423 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 RSPO3Q9BXY4 272 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 VIPAS39Q9H9C1 493 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 SAP30LQ9HAJ7 183 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 NTN4Q9HB63 628 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 CDH20Q9HBT6 801 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 THUMPD1Q9NXG2 353 aaKnown RBP11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 HAO1Q9UJM8 370 aa11.92□□□□□ -0.5
SMARCA4-206ENST00000538456 IGLV3-9A0A075B6K5 115 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 SLC22A23A1A5C7 686 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 ISPDA4D126 451 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 DNAJC9-AS1A6NH13 148 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 C5orf58C9J3I9 102 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 C11orf98E9PRG8 122 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 SLC22A3O75751 556 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 FSHBP01225 129 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 ZCCHC18P0CG32 403 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 ZNF250P15622 560 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 GATA3P23771 443 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 BIDP55957 195 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 NCALDP61601 193 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 STX3Q13277 289 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 HFEQ30201 348 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 MMEL1Q495T6 779 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 NXNQ6DKJ4 435 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 ULK3Q6PHR2 472 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 NHLRC1Q6VVB1 395 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 WDR88Q6ZMY6 472 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 PIWIL3Q7Z3Z3 882 aaKnown RBP11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 KIRREL3Q8IZU9 778 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 SLC22A24Q8N4F4 322 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 SCAIQ8N9R8 606 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 GLB1L3Q8NCI6 653 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 BBS10Q8TAM1 723 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 C11orf40Q8WZ69 217 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 RAB1CQ92928 201 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 DVL3Q92997 716 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 ITCHQ96J02 903 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms