RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SHC1P29353 583 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 AQP2P41181 271 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 SLC6A8P48029 635 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 SLC16A1P53985 500 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ERVK-25P63136 954 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 PLA1AQ53H76 456 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF600Q6ZNG1 722 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 GHDCQ8N2G8 530 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 FAM98AQ8NCA5 519 aaKnown RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF563Q8TA94 476 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 TTC9Q92623 222 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 CCDC120Q96HB5 630 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 HYLS1Q96M11 299 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 NECAB3Q96P71 396 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 COQ7Q99807 217 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 THAP7Q9BT49 309 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 B3GNT4Q9C0J1 378 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 AKIRIN1Q9H9L7 192 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 C12orf10Q9HB07 376 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 INPP5EQ9NRR6 644 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 NUDT15Q9NV35 164 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 SLCO1C1Q9NYB5 712 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 MGAT4AQ9UM21 535 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 PPIEQ9UNP9 301 aaKnown RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 HIF3AQ9Y2N7 669 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 PI4KAP42356 2102 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 DMDP11532 3685 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 TMEM200CA6NKL6 621 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 E9PI62 339 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 KHNYNO15037 678 aaKnown RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 EEF1E1O43324 174 aaKnown RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 TFP02787 698 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ASAH2BP0C7U1 165 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 HOXC12P31275 282 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 RPL4P36578 427 aaKnown RBP9.73□□□□□ -0.85
CLIP1-210ENST00000538120 BDH1Q02338 343 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 PPA1Q15181 289 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ISXQ2M1V0 245 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 KRT74Q7RTS7 529 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 SSX6Q7RTT6 188 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 OR8H3Q8N146 312 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 RFLNBQ8N5W9 214 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 TMEM105Q8N8V8 129 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 TAAR8Q969N4 342 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 RASD2Q96D21 266 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 LRFN5Q96NI6 719 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ABHD1Q96SE0 405 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 DHRS9Q9BPW9 319 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 NMNAT2Q9BZQ4 307 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 KLHL1Q9NR64 748 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF222Q9UK12 451 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 CLEC4AQ9UMR7 237 aa9.73□□□□□ -0.85
CLIP1-210ENST00000538120 ADAMTS9Q9P2N4 1935 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 CIB4A0PJX0 185 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 OR6C68A6NDL8 312 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 NTN3O00634 580 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-210ENST00000538120 GRK6P43250 576 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 HCCSP53701 268 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 PER3P56645 1201 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 PRPS1P60891 318 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 TRIM61Q5EBN2 209 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 PHF19Q5T6S3 580 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 FAM122BQ7Z309 247 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 GLRX5Q86SX6 157 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 PPP1R3BQ86XI6 285 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 SAMD12Q8N8I0 201 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-210ENST00000538120 OR51L1Q8NGJ5 315 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 OR5W2Q8NH69 310 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF431Q8TF32 576 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-210ENST00000538120 ZMYND19Q96E35 227 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-210ENST00000538120 NMNAT3Q96T66 252 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 TBL1XR1Q9BZK7 514 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 MED28Q9H204 178 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 CDCP1Q9H5V8 836 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 ASB6Q9NWX5 421 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 BLOC1S5-TXNDC5H3BN57 136 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 RNF13O43567 381 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 GAAP10253 952 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 FGF5P12034 268 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF250P15622 560 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 THBS2P35442 1172 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 EMP2P54851 167 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 GGTLC2Q14390 218 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 C1QL3Q5VWW1 255 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 TEX261Q6UWH6 196 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 RFT1Q96AA3 541 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 GPR137Q96N19 417 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 LPAR4Q99677 370 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 GHITMQ9H3K2 345 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 NANSQ9NR45 359 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 CYSLTR2Q9NS75 346 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 POLHQ9Y253 713 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 RASD1Q9Y272 281 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 NPFFR2Q9Y5X5 522 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms