RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MEX3DQ86XN8 651 aaKnown RBP4.43□□□□□ -1.7
CLIP1-207ENST00000536634 CPNE9Q8IYJ1 553 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 MORN4Q8NDC4 146 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 OR5L2Q8NGL0 311 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 OR13C3Q8NGS6 347 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 OR8K3Q8NH51 312 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 NUBPLQ8TB37 319 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 CD200R1Q8TD46 325 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 ATL1Q8WXF7 558 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 PEX13Q92968 403 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 NEIL2Q969S2 332 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 THOC1Q96FV9 657 aaKnown RBP4.43□□□□□ -1.7
CLIP1-207ENST00000536634 RILPQ96NA2 401 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 TSNARE1Q96NA8 513 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 ZFP3Q96NJ6 502 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 RUNDC3BQ96NL0 473 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 FAM111AQ96PZ2 611 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 SEPHS2Q99611 448 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 PKP2Q99959 881 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 RBM4BQ9BQ04 359 aaKnown RBP4.43□□□□□ -1.7
CLIP1-207ENST00000536634 BPIFA3Q9BQP9 254 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 PCBD2Q9H0N5 130 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 MAN2C1Q9NTJ4 1040 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 RNF150Q9ULK6 438 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 PPP1R3CQ9UQK1 317 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 C15orf41Q9Y2V0 281 aa4.43□□□□□ -1.7
CLIP1-207ENST00000536634 FRG2CA6NGY1 282 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 H3BMM5 538 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 TRIM77I1YAP6 450 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 CTNSO60931 367 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 GAS8O95995 478 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 IGKV3-11P04433 115 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 SERPINA6P08185 405 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 ZSCAN5DPP0CG00 497 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 NR2F1P10589 423 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 POU2F1P14859 743 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 IGFBP5P24593 272 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 RPL22P35268 128 aaKnown RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 ZNF75DP51815 510 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 DIO3P55073 304 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 HADHBP55084 474 aaKnown RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 CASP9P55211 416 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 LIM2P55344 173 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 PAX9P55771 341 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 FBXW4P57775 412 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 VLDLRP98155 873 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 TOMM20Q15388 145 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 TTLL9Q3SXZ7 439 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 ADNP2Q6IQ32 1131 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 PRR27Q6MZM9 219 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 FIP1L1Q6UN15 594 aaKnown RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 SBSNQ6UWP8 590 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 CNEP1R1Q8N9A8 125 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 FAM83FQ8NEG4 500 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 TSPAN14Q8NG11 270 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 RAB3IL1Q8TBN0 382 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 ZNRF4Q8WWF5 429 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 SLC5A11Q8WWX8 675 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 ITFG2Q969R8 447 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 MS4A6EQ96DS6 147 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 SNF8Q96H20 258 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 GPR21Q99679 349 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 CNOT10Q9H9A5 744 aaKnown RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 NHEJ1Q9H9Q4 299 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 FBXO6Q9NRD1 293 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 CNIH4Q9P003 139 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.42□□□□□ -1.7
CLIP1-207ENST00000536634 IKBKGQ9Y6K9 419 aa4.42□□□□□ -1.7
CLIP1-207ENST00000536634 MEX3AA1L020 520 aaKnown RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 LRIT2A6NDA9 550 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 E9PQ18 207 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 ERI3O43414 337 aaKnown RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 GLRA3O75311 464 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 NXPH2O95156 264 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 CLPSP04118 112 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 APRTP07741 180 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 CPN1P15169 458 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 TNNI3P19429 210 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 OGNP20774 298 aaKnown RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 DPP4P27487 766 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 PTPN6P29350 595 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 STARP49675 285 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 LHX2P50458 406 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 PLA2G16P53816 162 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 MTTPP55157 894 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 UBASH3AP57075 661 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 LMO4P61968 165 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 STX4Q12846 297 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 EBPQ15125 230 aaKnown RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 BEX5Q5H9J7 111 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 SLC35D3Q5M8T2 416 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 ZNF470Q6ECI4 717 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 UGT3A1Q6NUS8 523 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 C12orf54Q6X4T0 127 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 GRAMD2AQ8IUY3 354 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 OR4N5Q8IXE1 308 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 KLHDC8AQ8IYD2 350 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 OR10G8Q8NGN5 311 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 SPPL2AQ8TCT8 520 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms