RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PRKAG1P54619 331 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ARL4CP56559 192 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SEC61A1P61619 476 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 RAE1P78406 368 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CCL8P80075 99 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 MRPS22P82650 360 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF117Q03924 483 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ZKSCAN8Q15776 578 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TBRG1Q3YBR2 411 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 GLE1Q53GS7 698 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SPRNQ5BIV9 151 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TCHHL1Q5QJ38 904 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 RNASEH2BQ5TBB1 312 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SEL1L2Q5TEA6 688 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 OR7E24Q6IFN5 339 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 WDR93Q6P2C0 686 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 UGT2A3Q6UWM9 527 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ZDHHC24Q6UX98 284 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 LRIG3Q6UXM1 1119 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 BRD3OSQ6XYD6 125 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TMPPEQ6ZT21 453 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 OLIG3Q7RTU3 272 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 GOLGA7Q7Z5G4 137 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 KRT77Q7Z794 578 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ADAMTSL2Q86TH1 951 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ISCA2Q86U28 154 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CCDC170Q8IYT3 715 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC43A2Q8N370 569 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 METTL4Q8N3J2 472 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ARFGAP2Q8N6H7 521 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TMCO5AQ8N6Q1 288 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 NAT8LQ8N9F0 302 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ZIC4Q8N9L1 334 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SPATA4Q8NEY3 305 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 OR4F5Q8NH21 305 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 LINC01006Q8NI28 216 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF675Q8TD23 568 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 GPR151Q8TDV0 419 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ZFP90Q8TF47 636 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 AENQ8WTP8 325 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ABHD5Q8WTS1 349 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 BCL2L2Q92843 193 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 RAB8BQ92930 207 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 R3HDM4Q96D70 268 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CERS2Q96G23 380 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 AURKBQ96GD4 344 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 RITA1Q96K30 269 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ARL5BQ96KC2 179 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TSPAN32Q96QS1 320 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SERPINI1Q99574 410 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 PAIP2Q9BPZ3 127 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CENPKQ9BS16 269 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 RSPO3Q9BXY4 272 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 FRMD8P1Q9BZ68 369 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 OR11A1Q9GZK7 315 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 DERL2Q9GZP9 239 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 NSRP1Q9H0G5 558 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 NOL11Q9H8H0 719 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CNOT10Q9H9A5 744 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 VIPAS39Q9H9C1 493 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 XAB2Q9HCS7 855 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SIRT3Q9NTG7 399 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 NECAP2Q9NVZ3 263 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 DCAF16Q9NXF7 216 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 GIN1Q9NXP7 522 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 PLEK2Q9NYT0 353 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TAS2R16Q9NYV7 291 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TAS2R9Q9NYW1 312 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 UBAP1Q9NZ09 502 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 KLHL9Q9P2J3 617 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 OPTCQ9UBM4 332 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 UPB1Q9UBR1 384 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 BAIAP2L1Q9UHR4 511 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 LEF1Q9UJU2 399 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 FBXO9Q9UK97 447 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 PSME2Q9UL46 239 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 GTF2A1LQ9UNN4 478 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 C19orf53Q9UNZ5 99 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC12A4Q9UP95 1085 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 STK38LQ9Y2H1 464 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 AMDHD2Q9Y303 409 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SIGLEC9Q9Y336 463 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 WIPI2Q9Y4P8 454 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 AUP1Q9Y679 476 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 KCNE3Q9Y6H6 103 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 IGKV3D-15A0A087WSY6 115 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SULT2B1O00204 365 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 PGRMC1O00264 195 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 PIP5K1BO14986 540 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 RGS16O15492 202 aaPredicted RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 BCAS1O75363 584 aaPredicted RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 UPK3AO75631 287 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CLPXO76031 633 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 KCNK2O95069 426 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CLPTM1O96005 669 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 NGFP01138 241 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 PDYNP01213 254 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 OPN1MWP04001 364 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CRYBA1P05813 215 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms