RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 A0A1W2PP11 408 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ARGFXA6NJG6 315 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 HNRNPCL3B7ZW38 293 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 D6RAR5 112 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 G3V3Q6 166 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SULT1C2O00338 296 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PDCD5O14737 125 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 XRCC3O43542 346 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 RAD1O60671 282 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TPST2O60704 377 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SCN2BO60939 215 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CSO75390 466 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ECI2O75521 394 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CRCPO75575 148 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 EIF3GO75821 320 aaKnown RBP eCLIP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CCNB2O95067 398 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CDRT1O95170 752 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 RLN2P04090 185 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 RLN1P04808 185 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 IL6P05231 212 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 HSMCR30P0CW71 290 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 HNRNPCL4P0DMR1 293 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CD1DP15813 335 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CEBPBP17676 345 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SPI1P17947 270 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 FCARP24071 287 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 HOXD9P28356 352 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 EPHA2P29317 976 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 LCN1P31025 176 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 MMP12P39900 470 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CCR2P41597 374 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 INPP1P49441 399 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CRISP3P54108 245 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ST8SIA6P61647 398 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 EEF1A1P68104 462 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 EEF1A2Q05639 463 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CRYZQ08257 329 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 C2orf80Q0P641 193 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 GPR176Q14439 515 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TSNQ15631 228 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CHRNA6Q15825 494 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 LPAL2Q16609 132 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TTLL9Q3SXZ7 439 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 AMZ1Q400G9 498 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 EEF1A1P5Q5VTE0 462 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PYHIN1Q6K0P9 492 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CNIH2Q6PI25 160 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ATRAIDQ6UW56 229 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 WASH2PQ6VEQ5 465 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ZNF730Q6ZMV8 503 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TMEM182Q6ZP80 229 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 RNF165Q6ZSG1 346 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 MEPCEQ7L2J0 689 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ZER1Q7Z7L7 766 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PRIMA1Q86XR5 153 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TBC1D19Q8N5T2 526 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SLC5A8Q8N695 610 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ZNF611Q8N823 705 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 RTL3Q8N8U3 475 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 OR6C4Q8NGE1 309 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ELP5Q8TE02 316 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 RNF139Q8WU17 664 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PCNPQ8WW12 178 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SLC5A11Q8WWX8 675 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 MTERF3Q96E29 417 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TCEAL4Q96EI5 215 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 MRPS24Q96EL2 167 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SCRN2Q96FV2 425 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 OTUB1Q96FW1 271 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SFXN2Q96NB2 322 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TSGA13Q96PP4 275 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 KCNA7Q96RP8 456 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ATOH8Q96SQ7 321 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ZBTB18Q99592 522 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TBL1YQ9BQ87 522 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 SPXQ9BT56 116 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PDCD10Q9BUL8 212 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PAPOLGQ9BWT3 736 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 CACNG6Q9BXT2 260 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ACTL8Q9H568 366 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TFB2MQ9H5Q4 396 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ALG9Q9H6U8 611 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 DDX31Q9H8H2 851 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 EVA1AQ9H8M9 152 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 B3GAT2Q9NPZ5 323 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PRMT8Q9NR22 394 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 ZNF275Q9NSD4 429 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 TXNL4BQ9NX01 149 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 THUMPD1Q9NXG2 353 aaKnown RBP4.78□□□□□ -1.64
C11orf54-212ENST00000533154 RHCGQ9UBD6 479 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 PADI2Q9Y2J8 665 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 LOXL2Q9Y4K0 774 aa4.78□□□□□ -1.64
C11orf54-212ENST00000533154 NUP210LQ5VU65 1888 aa4.77□□□□□ -1.65
C11orf54-212ENST00000533154 YLPM1P49750 1951 aaKnown RBP4.77□□□□□ -1.65
C11orf54-212ENST00000533154 RAB19A4D1S5 217 aa4.77□□□□□ -1.65
C11orf54-212ENST00000533154 ZNF729A6NN14 1252 aaPredicted RBP4.77□□□□□ -1.65
C11orf54-212ENST00000533154 EFCAB7A8K855 629 aa4.77□□□□□ -1.65
C11orf54-212ENST00000533154 I6L893 689 aaPredicted RBP4.77□□□□□ -1.65
C11orf54-212ENST00000533154 KCNK1O00180 336 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms