RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 SFXN4Q6P4A7 337 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 CCDC32Q9BV29 185 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 NDEL1Q9GZM8 345 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 CDCP1Q9H5V8 836 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 SACM1LQ9NTJ5 587 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 GTF2A1LQ9UNN4 478 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 CHCHD2Q9Y6H1 151 aaPredicted RBP13.67□□□□□ -0.22
SRPRA-206ENST00000532259 URB1O60287 2271 aaKnown RBP13.67□□□□□ -0.22
SRPRA-206ENST00000532259 MS4A18H0YCH9 400 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 SC5DO75845 299 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 SPARCP09486 303 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 CSF3P09919 207 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 IMPDH2P12268 514 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 DEFA1P59665 94 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 DEFA3P59666 94 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 PPP3R1P63098 170 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 TLE3Q04726 772 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 PUDPQ08623 228 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 NTRK2Q16620 822 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 MS4A18Q3C1V0 323 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF468Q5VIY5 522 aaPredicted RBP13.67□□□□□ -0.22
SRPRA-206ENST00000532259 RPL22L1Q6P5R6 122 aaKnown RBP13.67□□□□□ -0.22
SRPRA-206ENST00000532259 LRRN1Q6UXK5 716 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 WDSUB1Q8N9V3 476 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 ST8SIA1Q92185 356 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 TTC9Q92623 222 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 UBL7Q96S82 380 aaPredicted RBP13.67□□□□□ -0.22
SRPRA-206ENST00000532259 INTS14Q96SY0 518 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 TXNIPQ9H3M7 391 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 NOX4Q9NPH5 578 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 NXT1Q9UKK6 140 aaKnown RBP13.67□□□□□ -0.22
SRPRA-206ENST00000532259 B9D1Q9UPM9 204 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 MOKQ9UQ07 419 aa13.67□□□□□ -0.22
SRPRA-206ENST00000532259 PRRC2CQ9Y520 2896 aaKnown RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF593O00488 134 aaPredicted RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 OR2T1O43869 369 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 DOK2O60496 412 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 HTR3AP46098 478 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 RAB15P59190 212 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 CLPPQ16740 277 aaPredicted RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 PLPPR5Q32ZL2 321 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 FAM220AQ7Z4H9 259 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 MDGA2Q7Z553 956 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 PXKQ7Z7A4 578 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 CDC20BQ86Y33 519 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 MS4A15Q8N5U1 240 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF519Q8TB69 540 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 STK35Q8TDR2 534 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 CFAP47Q6ZTR5 3102 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 NSG1A0A0A6YYJ2 146 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 TFECO14948 347 aaPredicted RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 FLRT2O43155 660 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 WNT11O96014 354 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 F10P00742 488 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 NAGAP17050 411 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 TCN2P20062 427 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 KLK2P20151 261 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 APOBEC1P41238 236 aaKnown RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 FOLR3P41439 243 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF528Q3MIS6 628 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 GPAT4Q86UL3 456 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF433Q8N7K0 673 aaPredicted RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF248Q8NDW4 579 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 OR4K17Q8NGC6 315 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 RGP1Q92546 391 aaPredicted RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 GNRHR2Q96P88 292 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 SLCO1C1Q9NYB5 712 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 EXTL2Q9UBQ6 330 aa13.66□□□□□ -0.22
SRPRA-206ENST00000532259 COA3Q9Y2R0 106 aaPredicted RBP13.66□□□□□ -0.22
SRPRA-206ENST00000532259 PCNX2A6NKB5 2137 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 A0A0G2JK05 382 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 SLC22A23A1A5C7 686 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 ANKRD33BA6NCL7 494 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 KRT8P05787 483 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 EIF4EP06730 217 aaKnown RBP13.65□□□□□ -0.22
SRPRA-206ENST00000532259 CCL3P10147 92 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 SNRPBP14678 240 aaKnown RBP13.65□□□□□ -0.22
SRPRA-206ENST00000532259 RAB3BP20337 219 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 GALP22466 123 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 MYBPHQ13203 477 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF684Q5T5D7 378 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 DCAF12Q5T6F0 453 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 HBMQ6B0K9 141 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 XKRXQ6PP77 449 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 RAB11FIP2Q7L804 512 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 MINDY2Q8NBR6 621 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 PPP1R14AQ96A00 147 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 DDIT4LQ96D03 193 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 OR5B2Q96R09 309 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 ZNF700Q9H0M5 742 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 SP140LQ9H930 580 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 MRPL22Q9NWU5 206 aaKnown RBP13.65□□□□□ -0.22
SRPRA-206ENST00000532259 FRRS1LQ9P0K9 344 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 TRAPPC4Q9Y296 219 aa13.65□□□□□ -0.22
SRPRA-206ENST00000532259 IGKV1D-43A0A0B4J1Z2 117 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms