RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MEX3DQ86XN8 651 aaKnown RBP13.5□□□□□ -0.25
CAPN1-213ENST00000527897 PRRC1Q96M27 445 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 CA10Q9NS85 328 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 ADA2Q9NZK5 511 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 CRNNQ9UBG3 495 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-213ENST00000527897 SNX13Q9Y5W8 968 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 GMNCA6NCL1 334 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 SNX3O60493 162 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 IGKV3-15P01624 115 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 IFI30P13284 250 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 PCSK6P29122 969 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 PTDSS1P48651 473 aaKnown RBP13.49□□□□□ -0.25
CAPN1-213ENST00000527897 SNRPD2P62316 118 aaKnown RBP13.49□□□□□ -0.25
CAPN1-213ENST00000527897 MYBPC1Q00872 1141 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 GSG1Q2KHT4 349 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 C3orf36Q3SXR2 165 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 CLEC2AQ6UVW9 174 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 CCDC36Q8IYA8 594 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 SYT14Q8NB59 555 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 MOSPD2Q8NHP6 518 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 GEMIN6Q8WXD5 167 aaKnown RBP13.49□□□□□ -0.25
CAPN1-213ENST00000527897 NANOS1Q8WY41 292 aaKnown RBP13.49□□□□□ -0.25
CAPN1-213ENST00000527897 TMEM54Q969K7 222 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 SLC25A44Q96H78 314 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-213ENST00000527897 HSH2DQ96JZ2 352 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 VRK1Q99986 396 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-213ENST00000527897 RHNO1Q9BSD3 238 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 FNDC11Q9BVV2 318 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 REG4Q9BYZ8 158 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 INIPQ9NRY2 104 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 EGFL7Q9UHF1 273 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 A4GNTQ9UNA3 340 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 TLN2Q9Y4G6 2542 aa13.49□□□□□ -0.25
CAPN1-213ENST00000527897 IGHV2OR16-5A0A0B4J2B6 119 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 LY6HO94772 140 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 IGHG1P01857 330 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 QDPRP09417 244 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 OR4A8P0C604 315 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 PATE4P0C8F1 98 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 THRBP10828 461 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 FUT4P22083 530 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 SERPINF1P36955 418 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 TOP3AQ13472 1001 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-213ENST00000527897 LAPTM4AQ15012 233 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 IFI44LQ53G44 452 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 KRT80Q6KB66 452 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 C8orf82Q6P1X6 216 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-213ENST00000527897 HACD2Q6Y1H2 254 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 CBLL1Q75N03 491 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF525Q8N782 197 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 RNF148Q8N7C7 305 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 FAM169BQ8N8A8 192 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 OR4F15Q8NGB8 312 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 BPIFA2Q96DR5 249 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 POM121Q96HA1 1249 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF347Q96SE7 839 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 NOX3Q9HBY0 568 aa13.48□□□□□ -0.25
CAPN1-213ENST00000527897 CR1P17927 2039 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 CSPG4Q6UVK1 2322 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 ARFGEF3Q5TH69 2177 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 IGHV4-30-2A0A087WSY4 118 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 H7C417 338 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 NDUFAB1O14561 156 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 DHHO43323 396 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 RAB36O95755 333 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 PGA4P0DJD7 388 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 PGA3P0DJD8 388 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 SAGP10523 405 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-213ENST00000527897 HOXB4P17483 251 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-213ENST00000527897 THBS4P35443 961 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 GIPRP48546 466 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 RAB1AP62820 205 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 LSM11P83369 360 aaKnown RBP eCLIP13.47□□□□□ -0.25
CAPN1-213ENST00000527897 HGFACQ04756 655 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 SNTB2Q13425 540 aaKnown RBP13.47□□□□□ -0.25
CAPN1-213ENST00000527897 TRAM2Q15035 370 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF730Q6ZMV8 503 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 IGFN1Q86VF2 1251 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 SLC22A24Q8N4F4 322 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 RBM15BQ8NDT2 890 aaKnown RBP13.47□□□□□ -0.25
CAPN1-213ENST00000527897 SH3GL3Q99963 347 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 SPAG4Q9NPE6 437 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 B3GNT2Q9NY97 397 aa13.47□□□□□ -0.25
CAPN1-213ENST00000527897 NSD1Q96L73 2696 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-213ENST00000527897 VSTM5A8MXK1 200 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 GMNNO75496 209 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.25
CAPN1-213ENST00000527897 UBL3O95164 117 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 FARS2O95363 451 aaKnown RBP13.46□□□□□ -0.25
CAPN1-213ENST00000527897 TP53P04637 393 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-213ENST00000527897 TCN1P20061 433 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-213ENST00000527897 PRDX6P30041 224 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF84P51523 738 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 DAG1Q14118 895 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 RAB39AQ14964 217 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 ADIPOQQ15848 244 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms