RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TMEM249Q2WGJ8 235 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 ERICH5Q6P6B1 374 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 DEF8Q6ZN54 512 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF584Q8IVC4 421 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 CCDC36Q8IYA8 594 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 ZCCHC24Q8N2G6 241 aaKnown RBP9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 RASSF5Q8WWW0 418 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 FAM168AQ92567 244 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 TNFRSF13CQ96RJ3 184 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 MDFIQ99750 246 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF442Q9H7R0 627 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 B3GAT2Q9NPZ5 323 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 NANSQ9NR45 359 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 GLTPQ9NZD2 209 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 BAG5Q9UL15 447 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 CAPN7Q9Y6W3 813 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 MALRD1Q5VYJ5 2156 aa9.02□□□□□ -0.97
PRPF40B-204ENST00000527253 BLOC1S5-TXNDC5H3BN57 136 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 hCG_2039718K7EN88 272 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 PIP5K1CO60331 668 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 OR7A10O76100 309 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 OR5F1O95221 314 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 MT-ND1P03886 318 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 F13BP05160 661 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 TSPAN19P0C672 248 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 PGA4P0DJD7 388 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 PGA3P0DJD8 388 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 BMP4P12644 408 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC25A16P16260 332 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 NPR2P20594 1047 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 MDH1P40925 334 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 AQP2P41181 271 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 GIPRP48546 466 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 TAS2R41P59536 307 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SNRPD2P62316 118 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 RAB1AP62820 205 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 RPL18Q07020 188 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SNTB2Q13425 540 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 RAB39AQ14964 217 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 HIST3H3Q16695 136 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 GSG1Q2KHT4 349 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 KRT80Q6KB66 452 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 C8orf82Q6P1X6 216 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SPATA21Q7Z572 469 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 TREML1Q86YW5 311 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 MICU2Q8IYU8 434 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 CDK20Q8IZL9 346 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SVOPLQ8N434 492 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 PCYOX1LQ8NBM8 494 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 OR2T12Q8NG77 320 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 MOSPD2Q8NHP6 518 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SGTBQ96EQ0 304 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC25A44Q96H78 314 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 FOXN4Q96NZ1 517 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SEPHS2Q99611 448 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SH3GL3Q99963 347 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 VRK1Q99986 396 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 MRPL13Q9BYD1 178 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 MOV10Q9HCE1 1003 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 GID8Q9NWU2 228 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 A4GNTQ9UNA3 340 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 SNX13Q9Y5W8 968 aa9.01□□□□□ -0.97
PRPF40B-204ENST00000527253 FFAR1O14842 300 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC22A2O15244 555 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 DHHO43323 396 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 TLX2O43763 284 aaPredicted RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 BCL10O95999 233 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 TP53P04637 393 aaPredicted RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 HIST1H2ABP04908 130 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 QDPRP09417 244 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 IGHV4-31P0DP07 118 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 UMPSP11172 480 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 COX4I1P13073 169 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 USF1P22415 310 aaPredicted RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 RBM34P42696 430 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 YAP1P46937 504 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 PTDSS1P48651 473 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 PPOXP50336 477 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 PDLIM4P50479 330 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 SELENOWP63302 87 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 VLDLRP98155 873 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 MYBPC1Q00872 1141 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 LIPEQ05469 1076 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 DAG1Q14118 895 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 LAPTM4AQ15012 233 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 FXNQ16595 210 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 LRRC23Q53EV4 343 aaPredicted RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 ARMC4Q5T2S8 1044 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 HIST3H2AQ7L7L0 130 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 NANOGNBQ7Z5D8 188 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 VTCN1Q7Z7D3 282 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 MEX3DQ86XN8 651 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC22A24Q8N4F4 322 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 RP9Q8TA86 221 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 TMEM239Q8WW34 195 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 LIPHQ8WWY8 451 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 ASB10Q8WXI3 467 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 HIST1H2ACQ93077 130 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 MCHR2Q969V1 340 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms