RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PNLIPRP2P54317 469 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 BIDP55957 195 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 DGCR2P98153 550 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 RASGEF1BQ0VAM2 473 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 NDUFAF7Q7L592 441 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ZNF615Q8N8J6 731 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 IL17RDQ8NFM7 739 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 ZNF431Q8TF32 576 aaPredicted RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 KIAA1143Q96AT1 154 aaPredicted RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 SLC41A2Q96JW4 573 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 NKX3-1Q99801 234 aaPredicted RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 PDCD10Q9BUL8 212 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 SEMA4CQ9C0C4 833 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 OR2B2Q9GZK3 357 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 NXF2Q9GZY0 626 aaKnown RBP9.23□□□□□ -0.93
MCF2-209ENST00000520602 FKRPQ9H9S5 495 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 COPS3Q9UNS2 423 aa9.23□□□□□ -0.93
MCF2-209ENST00000520602 A0A1W2PR77 199 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 SMLR1H3BR10 107 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 ARPC3O15145 178 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 OR2J2O76002 312 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 ZNF432O94892 652 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 PUDPQ08623 228 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 GPR176Q14439 515 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 RAB11BQ15907 218 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 SGCBQ16585 318 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 KLHL26Q53HC5 615 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 TMEM53Q6P2H8 277 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 CORO6Q6QEF8 472 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 APOOLQ6UXV4 268 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 NOXA1Q86UR1 476 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 SLC25A44Q96H78 314 aaPredicted RBP9.22□□□□□ -0.93
MCF2-209ENST00000520602 WDFY2Q96P53 400 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 WDR77Q9BQA1 342 aaPredicted RBP9.22□□□□□ -0.93
MCF2-209ENST00000520602 PRRG4Q9BZD6 226 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 CHRNA9Q9UGM1 479 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 EMC9Q9Y3B6 208 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 ZFPL1O95159 310 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 F10P00742 488 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 HCKP08631 526 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 ATF1P18846 271 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 RPS4Y1P22090 263 aaKnown RBP9.22□□□□□ -0.93
MCF2-209ENST00000520602 GDNFP39905 211 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 DAP3P51398 398 aaKnown RBP9.22□□□□□ -0.93
MCF2-209ENST00000520602 YIF1BQ5BJH7 314 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 FAM205BPQ63HN1 556 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 DEFB123Q8N688 67 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 NPEPL1Q8NDH3 523 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 OR51D1Q8NGF3 324 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 CCDC74BQ96LY2 380 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 PCED1AQ9H1Q7 454 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 CHRDQ9H2X0 955 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 ZC4H2Q9NQZ6 224 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 SLC22A13Q9Y226 551 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 TRAPPC4Q9Y296 219 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 LRRK1Q38SD2 2015 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 RTTNQ86VV8 2226 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 HELZP42694 1942 aaKnown RBP9.22□□□□□ -0.93
MCF2-209ENST00000520602 A0A1W2PNR3 127 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 CENPBD1B2RD01 187 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 MEN1O00255 615 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 UBL3O95164 117 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 ARSBP15848 533 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 S100A1P23297 94 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 SLC26A5P58743 744 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 PWWP2BQ6NUJ5 590 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 HPF1Q9NWY4 346 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 SLC39A1Q9NY26 324 aa9.22□□□□□ -0.93
MCF2-209ENST00000520602 KIAA1671Q9BY89 1806 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 A6NIZ1 184 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 NPIPA2E9PIF3 369 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 NPIPA3F8WFD2 350 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 GSTT2P0CG29 244 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 EPXP11678 715 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 ZNF24P17028 368 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 RAP1BP61224 184 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 RAP1AP62834 184 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 LTBQ06643 244 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 SF3B4Q15427 424 aaKnown RBP eCLIP9.21□□□□□ -0.93
MCF2-209ENST00000520602 PCGF3Q3KNV8 242 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 SLC22A10Q63ZE4 541 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 ATG4DQ86TL0 474 aaPredicted RBP9.21□□□□□ -0.93
MCF2-209ENST00000520602 PLPP7Q8NBV4 271 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 IFI44Q8TCB0 444 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 SLC7A6Q92536 515 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 FAM46BQ96A09 425 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 FAM131CQ96AQ9 280 aa9.21□□□□□ -0.93
MCF2-209ENST00000520602 EP300Q09472 2414 aaPredicted RBP9.21□□□□□ -0.93
MCF2-209ENST00000520602 METTL21EPA6NDL7 271 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 KLF4O43474 513 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 MT-ATP6P00846 226 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 NPR2P20594 1047 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 C4BPBP20851 252 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 FXYD6P3P58550 94 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 SKP2Q13309 424 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 LIN54Q6MZP7 749 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 C9orf40Q8IXQ3 194 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 OR6V1Q8N148 313 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 D2HGDHQ8N465 521 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms