RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 LAPTM4AQ15012 233 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 GSG1Q2KHT4 349 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 ALG10Q5BKT4 473 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 OAFQ86UD1 273 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 KRTAP1-3Q8IUG1 177 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 ANKS4BQ8N8V4 417 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 NOXO1Q8NFA2 376 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 OR13C2Q8NGS9 318 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 OR51A7Q8NH64 312 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 MAGEE2Q8TD90 523 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-221ENST00000520265 ACOT11Q8WXI4 607 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-221ENST00000520265 HTRA1Q92743 480 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 ZNF347Q96SE7 839 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 TRAF4Q9BUZ4 470 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-221ENST00000520265 NDEL1Q9GZM8 345 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 NELFAQ9H3P2 528 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 SEC61A2Q9H9S3 476 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 MOV10Q9HCE1 1003 aaKnown RBP12.35□□□□□ -0.43
VEGFA-221ENST00000520265 ENPP4Q9Y6X5 453 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 HEATR1Q9H583 2144 aaKnown RBP12.35□□□□□ -0.43
VEGFA-221ENST00000520265 ARID1AO14497 2285 aa12.35□□□□□ -0.43
VEGFA-221ENST00000520265 TEP1Q99973 2627 aaKnown RBP12.34□□□□□ -0.43
VEGFA-221ENST00000520265 ITPR3Q14573 2671 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 TMCC2O75069 709 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 FARS2O95363 451 aaKnown RBP12.34□□□□□ -0.43
VEGFA-221ENST00000520265 FAM107AO95990 144 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 H1F0P07305 194 aaKnown RBP12.34□□□□□ -0.43
VEGFA-221ENST00000520265 QDPRP09417 244 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 BMP4P12644 408 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-221ENST00000520265 CBR1P16152 277 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 PAX7P23759 505 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 ARR3P36575 388 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.432e-28■■□□□ 11.6
VEGFA-221ENST00000520265 SPIBQ01892 262 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 NAAAQ02083 359 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 C1QTNF12Q5T7M4 302 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 TBPL2Q6SJ96 375 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 FAM86B1Q8N7N1 296 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 OR52J3Q8NH60 311 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 ASB10Q8WXI3 467 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 NSMAFQ92636 917 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 BDH2Q9BUT1 245 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 KATNB1Q9BVA0 655 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 RNF121Q9H920 327 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 KRCC1Q9NPI7 259 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-221ENST00000520265 CBLN4Q9NTU7 201 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 DCAF13Q9NV06 445 aaKnown RBP12.34□□□□□ -0.43
VEGFA-221ENST00000520265 USF3Q68DE3 2245 aa12.34□□□□□ -0.43
VEGFA-221ENST00000520265 HIVEP1P15822 2718 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 ZNF503-AS2A6NEH8 195 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 B2RBV5 119 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 FFAR1O14842 300 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 ARPC2O15144 300 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 ENTPD5O75356 428 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 TRMUO75648 421 aaKnown RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 UBL3O95164 117 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 INHBBP09529 407 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 PATE4P0C8F1 98 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 PGA4P0DJD7 388 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 PGA3P0DJD8 388 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 ACADSP16219 412 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 MAKP20794 623 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 FUT4P22083 530 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 NUDT6P53370 316 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 CTXN1P60606 82 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 SNRPD2P62316 118 aaKnown RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 CHRNB3Q05901 458 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 CLEC12BQ2HXU8 276 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 KRT80Q6KB66 452 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 ZNF544Q6NX49 715 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 PRSS57Q6UWY2 283 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 MBOAT2Q6ZWT7 520 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 CCDC36Q8IYA8 594 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 FAM46AQ96IP4 442 aaKnown RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 NSL1Q96IY1 281 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 C18orf12Q96KH6 178 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 SH3GL3Q99963 347 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 GSX1Q9H4S2 264 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 NMNAT1Q9HAN9 279 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 MAN2C1Q9NTJ4 1040 aa12.33□□□□□ -0.44
VEGFA-221ENST00000520265 ZNF701Q9NV72 531 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 STX18Q9P2W9 335 aaKnown RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 GDF2Q9UK05 429 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-221ENST00000520265 A0A087WUU8 490 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 DHHO43323 396 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 SSX4O60224 188 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 NDUFS7O75251 213 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 CD8AP01732 235 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 HSD17B1P14061 328 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 ITGA2P17301 1181 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 RHCEP18577 417 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 CALCRP30988 508 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 APOBEC3AP31941 199 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-221ENST00000520265 ACVR1BP36896 505 aa12.32□□□□□ -0.44
VEGFA-221ENST00000520265 GIPRP48546 466 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms