RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NDPQ00604 133 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 STX3Q13277 289 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ORC2Q13416 577 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 EXOSC2Q13868 293 aaKnown RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 PIGHQ14442 188 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 KCNJ11Q14654 390 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 TMED2Q15363 201 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 TGFBIQ15582 683 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 TRIP10Q15642 601 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ADPRMQ3LIE5 342 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 DCAF4L1Q3SXM0 396 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CCDC153Q494R4 210 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 UFSP1Q6NVU6 142 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 RNASEKQ6P5S7 137 aaKnown RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CBLN3Q6UW01 205 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 FAM151BQ6UXP7 276 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 FAM122BQ7Z309 247 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 LRRC8AQ8IWT6 810 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 IQCKQ8N0W5 287 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 GABRG1Q8N1C3 465 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CLEC4FQ8N1N0 589 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 NECAP1Q8NC96 275 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 TTLQ8NG68 377 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 OR5D13Q8NGL4 314 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 RHEBL1Q8TAI7 183 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 RAET1EQ8TD07 263 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 IL1F10Q8WWZ1 152 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ECHDC3Q96DC8 303 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CERS2Q96G23 380 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 COQ2Q96H96 371 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 PANX1Q96RD7 426 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CCNL2Q96S94 520 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CGREF1Q99674 301 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 SLC30A2Q9BRI3 323 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 GSDMCQ9BYG8 508 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ROPN1BQ9BZX4 212 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 RAB1BQ9H0U4 201 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 TRIM45Q9H8W5 580 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF702PQ9H963 129 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 GPN2Q9H9Y4 310 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 C12orf10Q9HB07 376 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 NRBP2Q9NSY0 501 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 C1orf123Q9NWV4 160 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 TAS2R7Q9NYW3 318 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ADAM22Q9P0K1 906 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 SLC7A8Q9UHI5 535 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 VANGL2Q9ULK5 521 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 ABCG2Q9UNQ0 655 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 RASD1Q9Y272 281 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 PRG3Q9Y2Y8 225 aaPredicted RBP2.63□□□□□ -1.99
VPS13B-207ENST00000518569 PLLPQ9Y342 182 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 WDR45Q9Y484 360 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 MAP3K15Q6ZN16 1313 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 CDHR2Q9BYE9 1310 aa2.63□□□□□ -1.99
VPS13B-207ENST00000518569 TNRQ92752 1358 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PTPRKQ15262 1439 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 DNMT1P26358 1616 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PPIAL4EA0A075B759 164 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 TRBV11-1A0A0K0K1C0 115 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ARGFXA6NJG6 315 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 LRRN3E7EW58 273 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 TOR1AO14656 332 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CASKO14936 926 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 COCHO43405 550 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 LATO43561 262 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SEMA3DO95025 777 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 RAB3DO95716 219 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 TNNC2P02585 160 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CRYGBP07316 175 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CD55P08174 381 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SERPINA6P08185 405 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 GSTT2P0CG29 244 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 GSTT2BP0CG30 244 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PPIAL4FP0DN26 164 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 S100A1P23297 94 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PSMB6P28072 239 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ALDH3A1P30838 453 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 LCN1P31025 176 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CASP14P31944 242 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 RPL4P36578 427 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PTGFRP43088 359 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 RPS5P46782 204 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 RFX3P48380 749 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SLC26A2P50443 739 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SEC61GP60059 68 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 OSTNP61366 133 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CDH17Q12864 832 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 DPYSL3Q14195 570 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 GANABQ14697 944 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 RFTN1Q14699 578 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SPCS2Q15005 226 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PSG3Q16557 428 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 GOLGA7BQ2TAP0 167 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 AKIRIN2Q53H80 203 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF470Q6ECI4 717 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ASPHD2Q6ICH7 369 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 TMIGD1Q6UXZ0 262 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 TFAP2EQ6VUC0 442 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 USP50Q70EL3 339 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PAGE2Q7Z2X7 111 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms