RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 TP53P04637 393 aaPredicted RBP13.21□□□□□ -0.29
TRIO-222ENST00000515144 BCKDHBP21953 392 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 PRSS48Q7RTY5 328 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 FBXO17Q96EF6 278 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 RGCCQ9H4X1 137 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 ACOT13Q9NPJ3 140 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 TAS2R16Q9NYV7 291 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 NLKQ9UBE8 527 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 SLC5A10A0PJK1 596 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 SLC22A20A6NK97 555 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 CENPBD1B2RD01 187 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 B8ZZF3 427 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 M0R082 166 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 MT-CO3P00414 261 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 TK1P04183 234 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 CLDN15P56746 228 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 OR1C1Q15619 314 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 GAB3Q8WWW8 586 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 ZNF587Q96SQ5 575 aaPredicted RBP13.21□□□□□ -0.29
TRIO-222ENST00000515144 FAM96BQ9Y3D0 163 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 ARAFP10398 606 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 BMP5P22003 454 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 TSFMP43897 325 aaKnown RBP13.21□□□□□ -0.29
TRIO-222ENST00000515144 HTR4Q13639 388 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 UBAC2Q8NBM4 344 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 OR13C9Q8NGT0 318 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 COQ10AQ96MF6 247 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 METTL9Q9H1A3 318 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 TREM2Q9NZC2 230 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 WDR81Q562E7 1941 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 GPR3P46089 330 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 TNK1Q13470 666 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 H1FNTQ75WM6 255 aaPredicted RBP13.21□□□□□ -0.29
TRIO-222ENST00000515144 FCRLAQ7L513 359 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 PLPP7Q8NBV4 271 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 ZNF582Q96NG8 517 aaPredicted RBP13.21□□□□□ -0.29
TRIO-222ENST00000515144 OCSTAMPQ9BR26 566 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 SEMA4GQ9NTN9 838 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 ONECUT1Q9UBC0 465 aa13.21□□□□□ -0.29
TRIO-222ENST00000515144 RRAS2P62070 204 aaPredicted RBP13.21□□□□□ -0.3
TRIO-222ENST00000515144 C16orf52Q8NHV5 167 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 CREB3L1Q96BA8 519 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 GPR173Q9NS66 373 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 SERTAD4Q9NUC0 356 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 MEGF11A6BM72 1044 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 D6RAR5 112 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 IGLV3-27P01718 113 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 PMP2P02689 132 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 C21orf33P30042 268 aaPredicted RBP13.21□□□□□ -0.3
TRIO-222ENST00000515144 AKR1C8PQ5T2L2 129 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 SPINK14Q6IE38 97 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 ARL6Q9H0F7 186 aa13.21□□□□□ -0.3
TRIO-222ENST00000515144 SPRY3O43610 288 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 SOX18P35713 384 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 OR7G2Q8NG99 324 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 ASB17Q8WXJ9 295 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 NKX3-1Q99801 234 aaPredicted RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 MMP27Q9H306 513 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 FBXL4Q9UKA2 621 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 ZNF281Q9Y2X9 895 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 BLVRBP30043 206 aaPredicted RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 F2RL1P55085 397 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 SLC9A3R2Q15599 337 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 MFSD12Q6NUT3 480 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 C16orf47Q6ZP98 133 aaPredicted RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 CHDHQ8NE62 594 aaPredicted RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 CACNA1IQ9P0X4 2223 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 K7EQS6 105 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 IL13RA1P78552 427 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 TRMT61AQ96FX7 289 aaKnown RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 Q96M85 177 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 MTCH2Q9Y6C9 303 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 CRYBA1P05813 215 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 MYF6P23409 242 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 CAMLGP49069 296 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 EMDP50402 254 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 ZNF45Q02386 682 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 MEP1BQ16820 701 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 RBMS3Q6XE24 437 aaKnown RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 OVCH1Q7RTY7 1134 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 LSMEM2Q8N112 164 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 BEST4Q8NFU0 473 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 LIPHQ8WWY8 451 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 NEURL3Q96EH8 262 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 ARID1AO14497 2285 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 MDFIC2A0A1B0GVS7 189 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 CDHR4A6H8M9 788 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 I3L521 148 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 BEX5Q5H9J7 111 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 COQ5Q5HYK3 327 aa13.2□□□□□ -0.3
TRIO-222ENST00000515144 TRUB1Q8WWH5 349 aaKnown RBP13.2□□□□□ -0.3
TRIO-222ENST00000515144 RNF170Q96K19 258 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms