RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 K7EP13 123 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 RFXAPO00287 272 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2T1O43869 369 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 HPP00738 406 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 MBPP02686 304 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 ARG1P05089 322 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 KLK1P06870 262 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 IL3P08700 152 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SPARCP09486 303 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 NBEAP1P0C6P0 100 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 HLA-GP17693 338 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 RCC1P18754 421 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 CXCL3P19876 107 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 FCARP24071 287 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 C21orf33P30042 268 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 GCH1P30793 250 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 CALCRP30988 508 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 OR1E2P47887 323 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 CDX1P47902 265 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 PCBP3P57721 371 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 PPIGQ13427 754 aaKnown RBP eCLIP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 OR5I1Q13606 314 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 PIP5KL1Q5T9C9 394 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 LCTLQ6UWM7 567 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF605Q86T29 641 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 BAP18Q8IXM2 172 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM185AQ8NFB2 350 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 OR10K1Q8NGX5 313 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 WNT2BQ93097 391 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF354BQ96LW1 612 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2M4Q96R27 311 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 NAA11Q9BSU3 229 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM43Q9BTV4 400 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 OR51E2Q9H255 320 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 PPP1R3EQ9H7J1 279 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 ASF1BQ9NVP2 202 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SLCO1C1Q9NYB5 712 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC35A3Q9Y2D2 325 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 C5orf58C9J3I9 102 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 PLPP1O14494 284 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 NARSO43776 548 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 ERAL1O75616 437 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 STAG3L2P0CL84 134 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SSTR4P31391 388 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 PTTG1IPP53801 180 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM107Q6UX40 140 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 CHRDL2Q6WN34 429 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 RNF130Q86XS8 419 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 NRMQ8IXM6 262 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 JAGN1Q8N5M9 183 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 C2orf73Q8N5S3 287 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 OR8J1Q8NGP2 316 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 NFKBIDQ8NI38 313 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 APOBEC4Q8WW27 367 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 CNOT9Q92600 299 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 DNASE1L2Q92874 299 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 HIST1H2BAQ96A08 127 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 MESP1Q9BRJ9 268 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 HINT2Q9BX68 163 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC25A32Q9H2D1 315 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SLCO5A1Q9H2Y9 848 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC6A20Q9NP91 592 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 SMCO4Q9NRQ5 59 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 THSD1Q9NS62 852 aa6.84□□□□□ -1.31
PDLIM5-219ENST00000514743 GOLGA4Q13439 2230 aaKnown RBP6.84□□□□□ -1.32
PDLIM5-219ENST00000514743 MDC1Q14676 2089 aaKnown RBP6.84□□□□□ -1.32
PDLIM5-219ENST00000514743 TRBV11-1A0A0K0K1C0 115 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 A0A1W2PPV9 198 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 TBC1D3BA6NDS4 549 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 NKX6-3A6NJ46 265 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 J3KTA2 159 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 KIAA0513O60268 411 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 CDC14BO60729 498 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 GGCTO75223 188 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 HOXB5P09067 269 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 PPP3CBP16298 524 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 HOXA5P20719 270 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 CD1BP29016 333 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 DRD3P35462 400 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 OPRD1P41143 372 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 MNDAP41218 407 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 AGFG1P52594 562 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 TAS2R38P59533 333 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 RAP1BP61224 184 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 SIM1P81133 766 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 MXD1Q05195 221 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 GAS6Q14393 721 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 NUMA1Q14980 2115 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 CRB2Q5IJ48 1285 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 TBC1D3GQ6DHY5 549 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 ADAMTSL4Q6UY14 1074 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 MYPOPQ86VE0 399 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 BOLLQ8N9W6 283 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 CPT1CQ8TCG5 803 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 ABHD3Q8WU67 409 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 PPCDCQ96CD2 204 aa6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 SENP5Q96HI0 755 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-219ENST00000514743 THAP7Q9BT49 309 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms