RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ESRP2Q9H6T0 727 aaKnown RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 SMURF2Q9HAU4 748 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 CRLF2Q9HC73 371 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 MED29Q9NX70 200 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 GLTPQ9NZD2 209 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 GRHPRQ9UBQ7 328 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 DNAJB9Q9UBS3 223 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 MGAT4BQ9UQ53 548 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 SIGLEC7Q9Y286 467 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 POFUT2Q9Y2G5 429 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 CELSR2Q9HCU4 2923 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 M0R3G1 203 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 CDC42EP2O14613 210 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 FARS2O95363 451 aaKnown RBP8.04□□□□□ -1.12
NUP54-207ENST00000508583 ITGA5P08648 1049 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 ACADSP16219 412 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 FASP25445 335 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 SDHAP31040 664 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 NTF4P34130 210 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 CD47Q08722 323 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 COX10Q12887 443 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 TOP3AQ13472 1001 aaPredicted RBP8.04□□□□□ -1.12
NUP54-207ENST00000508583 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 GABRA6Q16445 453 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 NRN1LQ496H8 165 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 THEM4Q5T1C6 240 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 CARD17Q5XLA6 110 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 TMEM108Q6UXF1 575 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 DPY19L2P2Q6ZN68 376 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 ZER1Q7Z7L7 766 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 NOXO1Q8NFA2 376 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 MOSPD2Q8NHP6 518 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 GIPC3Q8TF64 312 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 ASB10Q8WXI3 467 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 DUS3LQ96G46 650 aaKnown RBP8.04□□□□□ -1.12
NUP54-207ENST00000508583 ZC3HAV1LQ96H79 300 aaKnown RBP8.04□□□□□ -1.12
NUP54-207ENST00000508583 ZNF570Q96NI8 536 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 RBP7Q96R05 134 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 TNFRSF13CQ96RJ3 184 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 EMC6Q9BV81 110 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 KATNB1Q9BVA0 655 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 TEX12Q9BXU0 123 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 DGCR6LQ9BY27 220 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 GPR35Q9HC97 309 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 ARMC1Q9NVT9 282 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 AP4S1Q9Y587 144 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 U3KQV3 271 aa8.04□□□□□ -1.12
NUP54-207ENST00000508583 IMPA2O14732 288 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 KLF4O43474 513 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 IDH3BO43837 385 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 UPK3AO75631 287 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 PGA4P0DJD7 388 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 PGA3P0DJD8 388 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ANXA8P13928 327 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 CDH2P19022 906 aaPredicted RBP8.03□□□□□ -1.12
NUP54-207ENST00000508583 EDNRAP25101 427 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 NOS3P29474 1203 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ACVR1BP36896 505 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 GSSP48637 474 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ACTR3P61158 418 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 SNTB1Q13884 538 aaKnown RBP8.03□□□□□ -1.12
NUP54-207ENST00000508583 MELKQ14680 651 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 TAB1Q15750 504 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 CEACAM16Q2WEN9 425 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 RFX4Q33E94 735 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 C9orf135Q5VTT2 229 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ANKRD34AQ69YU3 496 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 PGBD2Q6P3X8 592 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 DNM1P34Q6PK57 102 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 NHLRC1Q6VVB1 395 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ZNF620Q6ZNG0 422 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ZNF627Q7L945 461 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 WFDC8Q8IUA0 241 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 DEPDC4Q8N2C3 294 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 CLDN22Q8N7P3 220 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ARIH2OSQ8N7S6 290 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 AQP11Q8NBQ7 271 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 OR10G2Q8NGC3 310 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 OR4C15Q8NGM1 316 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 OR1K1Q8NGR3 316 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 TMEM54Q969K7 222 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 TXNDC15Q96J42 360 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 RADILQ96JH8 1075 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 OSBPL10Q9BXB5 764 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 KCNN2Q9H2S1 579 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 CLEC4MQ9H2X3 399 aaPredicted RBP8.03□□□□□ -1.12
NUP54-207ENST00000508583 DENND2DQ9H6A0 471 aaPredicted RBP8.03□□□□□ -1.12
NUP54-207ENST00000508583 SLC17A5Q9NRA2 495 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 RASSF1Q9NS23 344 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 KIF17Q9P2E2 1029 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ENOPH1Q9UHY7 261 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 FBXL3Q9UKT7 428 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 BAIAP2Q9UQB8 552 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 CDH10Q9Y6N8 788 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 UNC79Q9P2D8 2635 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 ALPK2Q86TB3 2170 aa8.03□□□□□ -1.12
NUP54-207ENST00000508583 NBPF19A0A087WUL8 3843 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ARPC4-TTLL3A0A0A6YYG9 625 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 CYSRT1A8MQ03 144 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ARPC3O15145 178 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms