RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 SULT2B1O00204 365 aa4□□□□□ -1.77
NUP54-206ENST00000508465 FBP2O00757 339 aa4□□□□□ -1.77
NUP54-206ENST00000508465 CASKO14936 926 aa4□□□□□ -1.77
NUP54-206ENST00000508465 TPST1O60507 370 aa4□□□□□ -1.77
NUP54-206ENST00000508465 HNRNPCL1O60812 293 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 RAMP1O60894 148 aa4□□□□□ -1.77
NUP54-206ENST00000508465 KRT34O76011 436 aa4□□□□□ -1.77
NUP54-206ENST00000508465 PGM3O95394 542 aa4□□□□□ -1.77
NUP54-206ENST00000508465 IGHV3-9P01782 118 aa4□□□□□ -1.77
NUP54-206ENST00000508465 CRHP06850 196 aa4□□□□□ -1.77
NUP54-206ENST00000508465 DBIP07108 87 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 YES1P07947 543 aa4□□□□□ -1.77
NUP54-206ENST00000508465 HNRNPCL4P0DMR1 293 aa4□□□□□ -1.77
NUP54-206ENST00000508465 POU2F1P14859 743 aa4□□□□□ -1.77
NUP54-206ENST00000508465 HOXB9P17482 250 aaPredicted RBP4□□□□□ -1.77
NUP54-206ENST00000508465 RPS4Y1P22090 263 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 TACR3P29371 465 aa4□□□□□ -1.77
NUP54-206ENST00000508465 AQP1P29972 269 aa4□□□□□ -1.77
NUP54-206ENST00000508465 AGTR1P30556 359 aa4□□□□□ -1.77
NUP54-206ENST00000508465 CD79BP40259 229 aa4□□□□□ -1.77
NUP54-206ENST00000508465 DIO1P49895 249 aa4□□□□□ -1.77
NUP54-206ENST00000508465 SUMO3P55854 103 aaPredicted RBP4□□□□□ -1.77
NUP54-206ENST00000508465 EEF1A1P68104 462 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 LRRC74AQ0VAA2 488 aa4□□□□□ -1.77
NUP54-206ENST00000508465 RASGEF1BQ0VAM2 473 aa4□□□□□ -1.77
NUP54-206ENST00000508465 PMS2P11Q13670 270 aa4□□□□□ -1.77
NUP54-206ENST00000508465 SELPLGQ14242 412 aa4□□□□□ -1.77
NUP54-206ENST00000508465 CAPRIN1Q14444 709 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 SQLEQ14534 574 aa4□□□□□ -1.77
NUP54-206ENST00000508465 GUSBP1Q15486 140 aa4□□□□□ -1.77
NUP54-206ENST00000508465 ZNF239Q16600 458 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 GLIPR1L2Q4G1C9 344 aa4□□□□□ -1.77
NUP54-206ENST00000508465 RUNDC3AQ59EK9 446 aa4□□□□□ -1.77
NUP54-206ENST00000508465 SLC25A53Q5H9E4 307 aa4□□□□□ -1.77
NUP54-206ENST00000508465 ZNF311Q5JNZ3 666 aa4□□□□□ -1.77
NUP54-206ENST00000508465 MRPL2Q5T653 305 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 EEF1A1P5Q5VTE0 462 aa4□□□□□ -1.77
NUP54-206ENST00000508465 CGB2Q6NT52 195 aa4□□□□□ -1.77
NUP54-206ENST00000508465 STAC2Q6ZMT1 411 aa4□□□□□ -1.77
NUP54-206ENST00000508465 ZNF836Q6ZNA1 936 aa4□□□□□ -1.77
NUP54-206ENST00000508465 FCRLAQ7L513 359 aa4□□□□□ -1.77
NUP54-206ENST00000508465 SERPINA11Q86U17 422 aa4□□□□□ -1.77
NUP54-206ENST00000508465 COMTD1Q86VU5 262 aa4□□□□□ -1.77
NUP54-206ENST00000508465 SLC15A3Q8IY34 581 aa4□□□□□ -1.77
NUP54-206ENST00000508465 PEX5LQ8IYB4 626 aa4□□□□□ -1.77
NUP54-206ENST00000508465 FAM71CQ8NEG0 241 aa4□□□□□ -1.77
NUP54-206ENST00000508465 WDR60Q8WVS4 1066 aa4□□□□□ -1.77
NUP54-206ENST00000508465 TMEM234Q8WY98 164 aa4□□□□□ -1.77
NUP54-206ENST00000508465 ST8SIA1Q92185 356 aa4□□□□□ -1.77
NUP54-206ENST00000508465 PIK3IP1Q96FE7 263 aa4□□□□□ -1.77
NUP54-206ENST00000508465 REXO5Q96IC2 774 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 GMPPAQ96IJ6 420 aaPredicted RBP4□□□□□ -1.77
NUP54-206ENST00000508465 ZNF300Q96RE9 604 aaPredicted RBP4□□□□□ -1.77
NUP54-206ENST00000508465 WFDC6Q9BQY6 131 aa4□□□□□ -1.77
NUP54-206ENST00000508465 MED18Q9BUE0 208 aa4□□□□□ -1.77
NUP54-206ENST00000508465 CCDC106Q9BWC9 280 aa4□□□□□ -1.77
NUP54-206ENST00000508465 TMEM120AQ9BXJ8 343 aa4□□□□□ -1.77
NUP54-206ENST00000508465 ZNF385DQ9H6B1 395 aa4□□□□□ -1.77
NUP54-206ENST00000508465 COQ10BQ9H8M1 238 aa4□□□□□ -1.77
NUP54-206ENST00000508465 HHATLQ9HCP6 504 aa4□□□□□ -1.77
NUP54-206ENST00000508465 A4GALTQ9NPC4 353 aa4□□□□□ -1.77
NUP54-206ENST00000508465 POLE3Q9NRF9 147 aa4□□□□□ -1.77
NUP54-206ENST00000508465 P2RX2Q9UBL9 471 aa4□□□□□ -1.77
NUP54-206ENST00000508465 NDRG3Q9UGV2 375 aa4□□□□□ -1.77
NUP54-206ENST00000508465 OSGIN1Q9UJX0 560 aa4□□□□□ -1.77
NUP54-206ENST00000508465 NDRG4Q9ULP0 352 aaKnown RBP4□□□□□ -1.77
NUP54-206ENST00000508465 ZNF443Q9Y2A4 671 aaPredicted RBP4□□□□□ -1.77
NUP54-206ENST00000508465 SLC35A3Q9Y2D2 325 aa4□□□□□ -1.77
NUP54-206ENST00000508465 PLEKHA6Q9Y2H5 1048 aa4□□□□□ -1.77
NUP54-206ENST00000508465 AKAP6Q13023 2319 aa4□□□□□ -1.77
NUP54-206ENST00000508465 HIVEP1P15822 2718 aa4□□□□□ -1.77
NUP54-206ENST00000508465 TRBV5-3A0A0A0MS03 114 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 A0A1W2PP18 115 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 TMEM247A6NEH6 219 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 GJE1A6NN92 205 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 EVPLLA8MZ36 301 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 AP4M1O00189 453 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 SMAD9O15198 467 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 CYTIPO60759 359 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 SS18L1O75177 396 aaPredicted RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 GCM2O75603 506 aaPredicted RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 AKR7A3O95154 331 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 PLAUP00749 431 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 ADAP00813 363 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CSTBP04080 98 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 GUSBP08236 651 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 FCGR2AP12318 317 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 PTNP21246 168 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CBLP22681 906 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CXCR1P25024 350 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 FPR3P25089 353 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 ELK4P28324 431 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 APOBEC1P41238 236 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 SLC1A3P43003 542 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 MRPL19P49406 292 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 ATP4BP51164 291 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 POLR2HP52434 150 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 ARFIP2P53365 341 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 IST1P53990 364 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CRISP3P54108 245 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms