RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 OR6N1Q8NGY5 312 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 C10orf105Q8TEF2 133 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 LIPHQ8WWY8 451 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 RCN3Q96D15 328 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 FBXO17Q96EF6 278 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 SORCS2Q96PQ0 1159 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 SEPHS2Q99611 448 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 FOXB1Q99853 325 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 RHNO1Q9BSD3 238 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 ULBP2Q9BZM5 246 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 PLK3Q9H4B4 646 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 DENND2DQ9H6A0 471 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 CMTM6Q9NX76 183 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 RIMS3Q9UJD0 308 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 AP3M1Q9Y2T2 418 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 YLPM1P49750 1951 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 ANK3Q12955 4377 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 TMEM129A0AVI4 362 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 ELOVL7A1L3X0 281 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 RNF13O43567 381 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 CD5LO43866 347 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 SHOX2O60902 331 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 SERPINI2O75830 405 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 OR6A2O95222 327 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 CSF3P09919 207 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 OR4A8P0C604 315 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PGA4P0DJD7 388 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PGA3P0DJD8 388 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 COX4I1P13073 169 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 SLC25A16P16260 332 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PCSK6P29122 969 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 THBS4P35443 961 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 OR1E2P47887 323 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PPOXP50336 477 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 TAS2R41P59536 307 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 SNRPD2P62316 118 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 SELENOWP63302 87 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 RPL18Q07020 188 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 LOXL1Q08397 574 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 NPRL3Q12980 569 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PIN1Q13526 163 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 MELKQ14680 651 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 HIST3H3Q16695 136 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 GSG1Q2KHT4 349 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 LRRC23Q53EV4 343 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PIWIL3Q7Z3Z3 882 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 NANOGNBQ7Z5D8 188 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 ARPINQ7Z6K5 226 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PRIMA1Q86XR5 153 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 TREML1Q86YW5 311 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 IL17RDQ8NFM7 739 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 PFN4Q8NHR9 129 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 TMEM255BQ8WV15 326 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 TMEM239Q8WW34 195 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 SLC25A44Q96H78 314 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 MRPL13Q9BYD1 178 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 C20orf141Q9NUB4 165 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 GLTPQ9NZD2 209 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 GMPR2Q9P2T1 348 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 A4GNTQ9UNA3 340 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 POFUT2Q9Y2G5 429 aa7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 CHD3Q12873 2000 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-209ENST00000506632 RTTNQ86VV8 2226 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 ATRQ13535 2644 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 NPIPB13A6NJU9 1138 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 CENPBD1B2RD01 187 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 VWC2LB2RUY7 222 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 NPIPB4C9JG80 1138 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 BLOC1S5-TXNDC5H3BN57 136 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 NME4O00746 187 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 DHHO43323 396 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 ATP8B1O43520 1251 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 TLX2O43763 284 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 GPRIN2O60269 458 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 CRLF1O75462 422 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 OR7A10O76100 309 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 LY6HO94772 140 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 BCL10O95999 233 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 HIST1H2ABP04908 130 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 IGFBP1P08833 259 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 UMPSP11172 480 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 CD79AP11912 226 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF35P13682 527 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 FUT1P19526 365 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 FUT4P22083 530 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 NR4A1P22736 598 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 CAPZA2P47755 286 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF133P52736 654 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 LSM11P83369 360 aaKnown RBP eCLIP7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 VLDLRP98155 873 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 PPP2R2BQ00005 443 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 LIPEQ05469 1076 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 RUNX1T1Q06455 604 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 DAG1Q14118 895 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 MSMPQ1L6U9 139 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 TMEM249Q2WGJ8 235 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 NRN1LQ496H8 165 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 HACD2Q6Y1H2 254 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 HIST3H2AQ7L7L0 130 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms