RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KLHL17Q6TDP4 642 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 NHLRC1Q6VVB1 395 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 PIWIL3Q7Z3Z3 882 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 TSEN54Q7Z6J9 526 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 CCDC36Q8IYA8 594 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 C20orf196Q8IYI0 205 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 LINC00471Q8N535 108 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 FAM86B1Q8N7N1 296 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 OR52N5Q8NH56 324 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 OR51A7Q8NH64 312 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 SLC7A13Q8TCU3 470 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 CCDC124Q96CT7 223 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 SLC7A6OSQ96CW6 309 aaPredicted RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 PLPPR2Q96GM1 343 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 BOD1Q96IK1 185 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 RADILQ96JH8 1075 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 CLPTM1LQ96KA5 538 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 ALPK1Q96QP1 1244 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 TNFRSF13CQ96RJ3 184 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 MMADHCQ9H3L0 296 aaPredicted RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 CRLF2Q9HC73 371 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 GPR35Q9HC97 309 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 MOV10Q9HCE1 1003 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 OBP2BQ9NPH6 170 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 MAN2C1Q9NTJ4 1040 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 STX18Q9P2W9 335 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 AURKCQ9UQB9 309 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 POFUT2Q9Y2G5 429 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 HIF3AQ9Y2N7 669 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 AMDHD2Q9Y303 409 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 MAGED1Q9Y5V3 778 aaPredicted RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 TCRBV5S2A0A599 114 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 SH3PXD2BA1X283 911 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 NPIPB13A6NJU9 1138 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 AQP12BA6NM10 295 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ZNF99A8MXY4 864 aaPredicted RBP6.37□□□□□ -1.39
GYPB-206ENST00000506516 CENPBD1B2RD01 187 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 NPIPB4C9JG80 1138 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ACOT8O14734 319 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 PIP5K1CO60331 668 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 OR10H3O60404 316 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ENTPD5O75356 428 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 IGHG1P01857 330 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 TSPAN19P0C672 248 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 RAP2AP10114 183 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 NR2C1P13056 603 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ACADSP16219 412 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 MAKP20794 623 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ATP6V1B2P21281 511 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 DNASE1P24855 282 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 PTAFRP25105 342 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 RRM2P31350 389 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 RPL4P36578 427 aaKnown RBP6.37□□□□□ -1.39
GYPB-206ENST00000506516 CSNK1A1P48729 337 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 HMGA2P52926 109 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 FOXG1P55316 489 aaPredicted RBP6.37□□□□□ -1.39
GYPB-206ENST00000506516 CLRN1P58418 232 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 CTXN1P60606 82 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ARF1P84077 181 aaKnown RBP6.37□□□□□ -1.39
GYPB-206ENST00000506516 LGALS3BPQ08380 585 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 CEACAM16Q2WEN9 425 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ZBED5Q49AG3 693 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 IQCCQ4KMZ1 466 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 NCMAPQ5T1S8 102 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 PGM2L1Q6PCE3 622 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 SHISA2Q6UWI4 295 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 TMEM108Q6UXF1 575 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 AQP12AQ8IXF9 295 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 TMEM123Q8N131 208 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 WDR31Q8NA23 367 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 OR4K5Q8NGD3 323 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 OR1K1Q8NGR3 316 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 FNDC8Q8TC99 324 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 MAGEE2Q8TD90 523 aaPredicted RBP6.37□□□□□ -1.39
GYPB-206ENST00000506516 GATAD2BQ8WXI9 593 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 DHRS1Q96LJ7 313 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ALKBH3Q96Q83 286 aaPredicted RBP6.37□□□□□ -1.39
GYPB-206ENST00000506516 RBP7Q96R05 134 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 ULBP2Q9BZM5 246 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 TXNIPQ9H3M7 391 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 YY1AP1Q9H869 796 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 PLEKHF2Q9H8W4 249 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 SLC17A5Q9NRA2 495 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 GLTPQ9NZD2 209 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 MGAT4BQ9UQ53 548 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 SLC25A15Q9Y619 301 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 DCHS2Q6V1P9 2916 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 PTPN13Q12923 2485 aa6.37□□□□□ -1.39
GYPB-206ENST00000506516 SPTAN1Q13813 2472 aaKnown RBP6.37□□□□□ -1.39
GYPB-206ENST00000506516 SPTBN1Q01082 2364 aaKnown RBP6.36□□□□□ -1.39
GYPB-206ENST00000506516 INTS1Q8N201 2190 aaKnown RBP6.36□□□□□ -1.39
GYPB-206ENST00000506516 TRAV27A0A087WT01 109 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 TRBV4-1A0A0J9YWV2 114 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 A0A1W2PR80 420 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 A6NIZ1 184 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 M0R1B8 84 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 TNFRSF11BO00300 401 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 GNGT2O14610 69 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 MGRN1O60291 552 aa6.36□□□□□ -1.39
GYPB-206ENST00000506516 PTP4A3O75365 173 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms