RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 CD5LO43866 347 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 ZNF432O94892 652 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 HIST1H2ABP04908 130 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 UMPSP11172 480 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 CBR1P16152 277 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 CD247P20963 164 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 SERPINF1P36955 418 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 GZMMP51124 257 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 MMP16P51512 607 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 CDH12P55289 794 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 PCBP3P57721 371 aaKnown RBP9.08□□□□□ -0.96
NR1I3-222ENST00000506018 ARF1P84077 181 aaKnown RBP9.08□□□□□ -0.96
NR1I3-222ENST00000506018 NAAAQ02083 359 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 LGALS3BPQ08380 585 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 FXNQ16595 210 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 HIST3H2AQ7L7L0 130 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 SLC46A3Q7Z3Q1 461 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 PXKQ7Z7A4 578 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 PTOV1Q86YD1 416 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 AQP12AQ8IXF9 295 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 MAPK1IP1LQ8NDC0 245 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 OR6N1Q8NGY5 312 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 OR5J2Q8NH18 312 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 PROX1Q92786 737 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 HIST1H2ACQ93077 130 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 FAM162AQ96A26 154 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 SLC41A3Q96GZ6 507 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 MPP4Q96JB8 637 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 OR2M2Q96R28 347 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 ARHGDIGQ99819 225 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 CA10Q9NS85 328 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 SEC14L4Q9UDX3 406 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 RPS6KA6Q9UK32 745 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 SAMD4AQ9UPU9 718 aaKnown RBP9.08□□□□□ -0.96
NR1I3-222ENST00000506018 POFUT2Q9Y2G5 429 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 RTTNQ86VV8 2226 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 YLPM1P49750 1951 aaKnown RBP9.08□□□□□ -0.96
NR1I3-222ENST00000506018 TRAPPC13A5PLN9 417 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 CPSF4LA6NMK7 179 aaKnown RBP9.07□□□□□ -0.96
NR1I3-222ENST00000506018 MS4A18H0YCH9 400 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 M0R3H8 397 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 TRAF3IP2O43734 574 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-222ENST00000506018 CRLF1O75462 422 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 F12P00748 615 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-222ENST00000506018 IGKV3-15P01624 115 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 BGLAPP02818 100 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 OPN1SWP03999 348 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 CECR9P0C854 216 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 ADORA3P0DMS8 318 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 TUBA1BP68363 451 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 TUBA4AP68366 448 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 NPRL3Q12980 569 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 DUSP7Q16829 419 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 MS4A18Q3C1V0 323 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 ENTPD8Q5MY95 495 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 CARD17Q5XLA6 110 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 LCN8Q6JVE9 175 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 VHLLQ6RSH7 139 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 TUBA1AQ71U36 451 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 LINGO2Q7L985 606 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 COMTD1Q86VU5 262 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 ZNF525Q8N782 197 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 NUP37Q8NFH4 326 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 OR10H5Q8NGA6 315 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 VANGL1Q8TAA9 524 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-222ENST00000506018 ADAMTS16Q8TE57 1224 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 STMN2Q93045 179 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 VRK1Q99986 396 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-222ENST00000506018 ULBP2Q9BZM5 246 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 SLC19A3Q9BZV2 496 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 RAB1BQ9H0U4 201 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 DENND2DQ9H6A0 471 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-222ENST00000506018 NANSQ9NR45 359 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 YAE1D1Q9NRH1 226 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 EGFL7Q9UHF1 273 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 FBXL3Q9UKT7 428 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 BAG5Q9UL15 447 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 SPEF1Q9Y4P9 236 aa9.07□□□□□ -0.96
NR1I3-222ENST00000506018 IGHV4-30-2A0A087WSY4 118 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 SLC35F4A4IF30 521 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 NDUFS8O00217 210 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 PLPP3O14495 311 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 ARPC2O15144 300 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 SERPINI2O75830 405 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 IFNA2P01563 188 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 IGLV1-44P01699 117 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 OR4A8P0C604 315 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 IFNA8P32881 189 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 KDELR2P33947 212 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 CSNK1A1P48729 337 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 PDLIM4P50479 330 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 IDH3GP51553 393 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-222ENST00000506018 ACTR3P61158 418 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 LOXL1Q08397 574 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-222ENST00000506018 EFNB3Q15768 340 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 SWI5Q1ZZU3 235 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 GSG1Q2KHT4 349 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 ZNF813Q6ZN06 617 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 CCDC80Q76M96 950 aa9.06□□□□□ -0.96
NR1I3-222ENST00000506018 HDDC2Q7Z4H3 204 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms