RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 NYNRINQ9P2P1 1898 aaKnown RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 NOVA1P51513 510 aaKnown RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 PCGF3Q3KNV8 242 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 AKIRIN2Q53H80 203 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 ZMAT1Q5H9K5 638 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 LRRC69Q6ZNQ3 347 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 DGAT2L6Q6ZPD8 337 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 DCDC5Q6ZRR9 648 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 VASH1Q7L8A9 365 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 OR5D14Q8NGL3 314 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 TM9SF4Q92544 642 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 NUDT15Q9NV35 164 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 IL20Q9NYY1 176 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 GSKIPQ9P0R6 139 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 B3GNT3Q9Y2A9 372 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 A0A087WUJ7 227 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 RAB3AP20336 220 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CLDN6P56747 220 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 MRPL21Q7Z2W9 205 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 ASB17Q8WXJ9 295 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 HSD17B8Q92506 261 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 BORCS8Q96FH0 119 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CDH20Q9HBT6 801 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CCDC59Q9P031 241 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CES1P1Q9UKY3 287 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 B3GALT1Q9Y5Z6 326 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 TMEM129A0AVI4 362 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 SLC43A1O75387 559 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 AMY2AP04746 511 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CAPZA1P52907 286 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 RNASE10Q5GAN6 216 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 FTMTQ8N4E7 242 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 FAM83FQ8NEG4 500 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CCDC120Q96HB5 630 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 C12orf49Q9H741 205 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CHST11Q9NPF2 352 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 PLA2G3Q9NZ20 509 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 SIGLEC7Q9Y286 467 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 WIF1Q9Y5W5 379 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 ARRDC5A6NEK1 342 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 DISC1C4P0D8 188 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 GATBO75879 557 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 AMY2BP19961 511 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 HMGA2P52926 109 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 PSMA6P60900 246 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 AQP6Q13520 282 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CD226Q15762 336 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CHRFAM7AQ494W8 412 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 BPHLQ86WA6 291 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 PLCZ1Q86YW0 608 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 DHRS1Q96LJ7 313 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 CXCL13O43927 109 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 EIF1BO60739 113 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 H2AFB2P0C5Z0 115 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 DIO1P49895 249 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 MVDP53602 400 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 GALEQ14376 348 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 EBPQ15125 230 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 DMRTC1Q5HYR2 192 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 SFXN4Q6P4A7 337 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 COX15Q7KZN9 410 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 D2HGDHQ8N465 521 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 POTEKPQ9BYX7 375 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 FKRPQ9H9S5 495 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 ZMAT3Q9HA38 289 aaKnown RBP12.82□□□□□ -0.36
TCOF1-207ENST00000504761 FANCFQ9NPI8 374 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 ASH2LQ9UBL3 628 aa12.82□□□□□ -0.36
TCOF1-207ENST00000504761 NOTOA8MTQ0 251 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 MT-CO3P00414 261 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 STARD6P59095 220 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 SELENOVP59797 346 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 ALKBH1Q13686 389 aaKnown RBP12.81□□□□□ -0.36
TCOF1-207ENST00000504761 IL11RAQ14626 422 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 PMS2CLQ68D20 193 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 ANKRD37Q7Z713 158 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 VSTM2LQ96N03 204 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 OPALINQ96PE5 141 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 MENTQ9BUN1 341 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 SLC25A19Q9HC21 320 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 SLC22A11Q9NSA0 550 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 P4HTMQ9NXG6 502 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 FUOMA2VDF0 154 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF16P17020 682 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-207ENST00000504761 Q499Y3 187 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF813Q6ZN06 617 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 SNIP1Q8TAD8 396 aaKnown RBP12.81□□□□□ -0.36
TCOF1-207ENST00000504761 LGALS14Q8TCE9 139 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 PIGCQ92535 297 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 MIB2Q96AX9 1013 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 HCAR1Q9BXC0 346 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 CHST2Q9Y4C5 530 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 D6RAR5 112 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 KLRC4-KLRK1H3BQV0 150 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 SCGB1D2O95969 90 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 PIPP12273 146 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms