RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NKAIN2Q5VXU1 208 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 TPGS2Q68CL5 300 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 ZNF470Q6ECI4 717 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 HIST2H2AA3Q6FI13 130 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 NEK5Q6P3R8 708 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 C2orf66Q6UXQ4 117 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 CCDC91Q7Z6B0 441 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 GALNT10Q86SR1 603 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 VASH2Q86V25 355 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.07□□□□□ -2.08
RIF1-212ENST00000498041 NUDCD3Q8IVD9 361 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 FUNDC1Q8IVP5 155 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 ZNF547Q8IVP9 402 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 C10orf67Q8IYJ2 551 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 PRR22Q8IZ63 422 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 OTUD6BQ8N6M0 293 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 Q8N7P7 452 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 CCNYL1Q8N7R7 359 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 ZNF740Q8NDX6 193 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 CLHC1Q8NHS4 586 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 MRPS31Q92665 395 aaKnown RBP2.07□□□□□ -2.08
RIF1-212ENST00000498041 HIST1H2ACQ93077 130 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 ZNF414Q96IQ9 312 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 CYYR1Q96J86 154 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 CATSPER2Q96P56 530 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 TSPAN18Q96SJ8 248 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 SLC39A3Q9BRY0 314 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 C1orf50Q9BV19 199 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 ABCG4Q9H172 646 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 TMEM245Q9H330 911 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 ASB8Q9H765 288 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 ANKRA2Q9H9E1 313 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 NRN1Q9NPD7 142 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 NLE1Q9NVX2 485 aaPredicted RBP2.07□□□□□ -2.08
RIF1-212ENST00000498041 COMMD8Q9NX08 183 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 VNN3Q9NY84 501 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 AKAP7Q9P0M2 348 aaPredicted RBP2.07□□□□□ -2.08
RIF1-212ENST00000498041 ATXN10Q9UBB4 475 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 PRODH2Q9UF12 536 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 MTRF1LQ9UGC7 380 aaKnown RBP2.07□□□□□ -2.08
RIF1-212ENST00000498041 RNF11Q9Y3C5 154 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 TEP1Q99973 2627 aaKnown RBP2.07□□□□□ -2.08
RIF1-212ENST00000498041 CPAMD8Q8IZJ3 1885 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 BRCA2P51587 3418 aa2.07□□□□□ -2.08
RIF1-212ENST00000498041 TNRC6BQ9UPQ9 1833 aaKnown RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 NAV2Q8IVL1 2488 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 A0A0G2JND7 137 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 A0A0J9YYE9 177 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 C1orf232A0A0U1RR37 186 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 C17orf51A8MQB3 221 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 A8MT66 165 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 LOC730098B7Z3J9 87 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 E9PBE3 544 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 KPNA3O00505 521 aaPredicted RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 SDHDO14521 159 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 COPEO14579 308 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 EI24O14681 340 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 TNFSF11O14788 317 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 ARPC1BO15143 372 aaKnown RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 LCMT2O60294 686 aaKnown RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 KLHL41O60662 606 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 SNNO75324 88 aaPredicted RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 PDE5AO76074 875 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 SRP72O76094 671 aaKnown RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 RHOBTB1O94844 696 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 CDK14O94921 469 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 LRATO95237 230 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 IL1BP01584 269 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 TRBC1P01850 177 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 FGF1P05230 155 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 ABHD2P08910 425 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 SNRPAP09012 282 aaKnown RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 ALPPL2P10696 532 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 SLC2A3P11169 496 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 RALBP11234 206 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 PVRP15151 417 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 NCK1P16333 377 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 GABRG2P18507 467 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 PEBP1P30086 187 aaKnown RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 SAA4P35542 130 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 SERPINB5P36952 375 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 STC1P52823 247 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 AQP5P55064 265 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 DIO3P55073 304 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 PKNOX1P55347 436 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 IL9RQ01113 521 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 HMGCS1Q01581 520 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 ACVR1Q04771 509 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 CDH17Q12864 832 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 STX3Q13277 289 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 TSTA3Q13630 321 aaPredicted RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 HTR4Q13639 388 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 GK3PQ14409 553 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 CAPRIN1Q14444 709 aaKnown RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 PRPSAP1Q14558 356 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 ZNF235Q14590 738 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 CD226Q15762 336 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 KLHL38Q2WGJ6 581 aa2.06□□□□□ -2.08
RIF1-212ENST00000498041 ZNF658BQ4V348 819 aaPredicted RBP2.06□□□□□ -2.08
RIF1-212ENST00000498041 PAGE3Q5JUK9 113 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms