RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RHOXF1Q8NHV9 184 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM45AQ8TCE6 357 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM131CQ96AQ9 280 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TM4SF19Q96DZ7 209 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 GPR78Q96P69 363 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MTERF1Q99551 399 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC6A7Q99884 636 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SYT11Q9BT88 431 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 WRAP53Q9BUR4 548 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 FTHL17Q9BXU8 183 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF436Q9C0F3 470 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PPIL3Q9H2H8 161 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CLMPQ9H6B4 373 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CALHM2Q9HA72 323 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MSL2Q9HCI7 577 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RANGRFQ9HD47 186 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SPHK2Q9NRA0 654 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NLE1Q9NVX2 485 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TAS2R13Q9NYV9 303 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 HSPB7Q9UBY9 170 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PCYOX1Q9UHG3 505 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF391Q9UJN7 358 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NME7Q9Y5B8 376 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUOX2Q9NRD8 1548 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 VWDEQ8N2E2 1590 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 LOC102723971A0A1B0GUV8 181 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A1W2PQM1 296 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 IGLON5A6NGN9 336 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR5H14A6NHG9 310 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NPIPB9F8W1W9 429 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 BLOC1S5-TXNDC5H3BN57 136 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TRAPPC2LH3BP13 241 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 GFYI3L273 518 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 AP4M1O00189 453 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CYB561D2O14569 222 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PDCD5O14737 125 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 MGST3O14880 152 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR2F2O95006 317 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TNFSF15O95150 251 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FGF19O95750 216 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TFP02787 698 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CA3P07451 260 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 GYPEP15421 78 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SPNP16150 400 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TBPP20226 339 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 C4BPBP20851 252 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OMGP23515 440 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CERS1P27544 350 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RBMS1P29558 406 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NTSR1P30989 418 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 LIPAP38571 399 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 MNDAP41218 407 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PNPLA4P41247 253 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TAS2R38P59533 333 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NME3Q13232 169 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB39AQ14964 217 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC10A1Q14973 349 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 QPRTQ15274 297 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SURF2Q15527 256 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NEDD8Q15843 81 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NRF1Q16656 503 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 HIST2H2ACQ16777 129 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ASPRV1Q53RT3 343 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OCIAD2Q56VL3 154 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 IDNKQ5T6J7 187 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FCRL6Q6DN72 434 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 LAMTOR1Q6IAA8 161 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR52W1Q6IF63 320 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CCDC144NLQ6NUI1 221 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM131AQ6UXB0 335 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SSX6Q7RTT6 188 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CPEB2Q7Z5Q1 589 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A1Q86YD7 464 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CPNE9Q8IYJ1 553 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 UBAC2Q8NBM4 344 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 KIAA0895Q8NCT3 520 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR9G4Q8NGQ1 327 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR14A16Q8NHC5 309 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM110DQ8TAY7 271 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 MRAPQ8TCY5 172 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ORAOV1Q8WV07 137 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ATG4AQ8WYN0 398 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ST8SIA1Q92185 356 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CNOT9Q92600 299 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RPUSD4Q96CM3 377 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 LMLNQ96KR4 655 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SPATA33Q96N06 139 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TNFRSF13CQ96RJ3 184 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ARHGDIGQ99819 225 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM121Q9BTD3 319 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FUNDC2Q9BWH2 189 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NUAK2Q9H093 628 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 GSTO2Q9H4Y5 243 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 UBE2ZQ9H832 354 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 UBTD1Q9HAC8 227 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 XPNPEP3Q9NQH7 507 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SCN3BQ9NY72 215 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RASL12Q9NYN1 266 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR14J1Q9UGF5 321 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF230Q9UIE0 474 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms