RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 FOXB1Q99853 325 aa11.43□□□□□ -0.58
EXOSC3-207ENST00000490516 EMC6Q9BV81 110 aa11.43□□□□□ -0.58
EXOSC3-207ENST00000490516 PTDSS2Q9BVG9 487 aa11.43□□□□□ -0.58
EXOSC3-207ENST00000490516 EGLN1Q9GZT9 426 aa11.43□□□□□ -0.58
EXOSC3-207ENST00000490516 TOR3AQ9H497 397 aa11.43□□□□□ -0.58
EXOSC3-207ENST00000490516 TUBB1Q9H4B7 451 aa11.43□□□□□ -0.58
EXOSC3-207ENST00000490516 FIS1Q9Y3D6 152 aa11.43□□□□□ -0.58
EXOSC3-207ENST00000490516 ZNF816-ZNF321PA0A0X1KG74 233 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 RNF103-CHMP3A0A140T963 221 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 GKN3PP0CG01 181 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 UQCRBP14927 111 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 PHBP35232 272 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 RPL3P39023 403 aaKnown RBP11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 MPV17P39210 176 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 RPS5P46782 204 aaKnown RBP11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 PCBP3P57721 371 aaKnown RBP11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 FGF12P61328 243 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 BTG1P62324 171 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 CAV1Q03135 178 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 C2orf54Q08AI8 447 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 PTGR1Q14914 329 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 LARS2Q15031 903 aaKnown RBP11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 GPAT3Q53EU6 434 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 MRPL2Q5T653 305 aaKnown RBP11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 ATG16L1Q676U5 607 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 FRMD7Q6ZUT3 714 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 KRTCAP2Q8N6L1 136 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 C11orf44Q8N8P7 122 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 MFSD8Q8NHS3 518 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 COQ8BQ96D53 544 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 SSBP3Q9BWW4 388 aaPredicted RBP11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 BCL2L14Q9BZR8 327 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 NANOGQ9H9S0 305 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 TMEM106BQ9NUM4 274 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 ATAD3AQ9NVI7 634 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 NINJ2Q9NZG7 142 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 GIMAP2Q9UG22 337 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 LRCH1Q9Y2L9 728 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 TMED5Q9Y3A6 229 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 DNAH9Q9NYC9 4486 aa11.42□□□□□ -0.58
EXOSC3-207ENST00000490516 PLSCR5A0PG75 271 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 CEACAM18A8MTB9 384 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 POC1B-GALNT4F8VUJ3 575 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 TNFRSF13BO14836 293 aaPredicted RBP11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 AHSA1O95433 338 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 WNT2P09544 360 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 BST1Q10588 318 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 HERPUD1Q15011 391 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 DEFB121Q5J5C9 76 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 SPATA46Q5T0L3 261 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 ZNF774Q6NX45 483 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 Q6ZTK2 550 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 CLECL1Q8IZS7 167 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 OR1J1Q8NGS3 322 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 MIPOL1Q8TD10 442 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 IPCEF1Q8WWN9 437 aaPredicted RBP11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 ULBP2Q9BZM5 246 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 RLIMQ9NVW2 624 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 GPR45Q9Y5Y3 372 aa11.41□□□□□ -0.58
EXOSC3-207ENST00000490516 KIR2DS1A0A191URI9 304 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 M0R082 166 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 AKAP8O43823 692 aaKnown RBP11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 XPNPEP2O43895 674 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 MFN2O95140 757 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 NEFHP12036 1026 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 HLA-DOBP13765 273 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 GTF2E2P29084 291 aaKnown RBP11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 ACAA2P42765 397 aaKnown RBP11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 IER3P46695 156 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 BPIFB3P59826 476 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 GNB2P62879 340 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 HPCAP84074 193 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 ZCCHC23Q6ZST2 131 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 MIER2Q8N344 545 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 ZNF417Q8TAU3 575 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 PNPT1Q8TCS8 783 aaKnown RBP11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 ZNF587Q96SQ5 575 aaPredicted RBP11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 SH3GL3Q99963 347 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 DUSP26Q9BV47 211 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 MECRQ9BV79 373 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 B3GAT2Q9NPZ5 323 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 TCF7L2Q9NQB0 619 aa11.4□□□□□ -0.58
EXOSC3-207ENST00000490516 TMEM114B3SHH9 223 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 H3BQF6 201 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 TSPAN9O75954 239 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 SNAP29O95721 258 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 AGR2O95994 175 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 HPRP00739 348 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 ADH4P08319 380 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 CBLP22681 906 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 PAFAH1B1P43034 410 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 EGR4Q05215 589 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 CD69Q07108 199 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 TBC1D28Q2M2D7 210 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 THEM4Q5T1C6 240 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 DHRS7BQ6IAN0 325 aaPredicted RBP11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 WBP2NLQ6ICG8 309 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 GDPGP1Q6ZNW5 385 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 LYG1Q8N1E2 194 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms