RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 C7orf34Q96L11 122 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 ZNF347Q96SE7 839 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 CDRT15Q96T59 188 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 FNDC11Q9BVV2 318 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 DCAF13Q9NV06 445 aaKnown RBP15.76■□□□□ 0.11
COL9A3-214ENST00000490398 GLTPQ9NZD2 209 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 POFUT2Q9Y2G5 429 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 V9GYQ6 96 aa15.76■□□□□ 0.11
COL9A3-214ENST00000490398 H7C1Q1 480 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 IGKV3-15P01624 115 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 IGHV4-39P01824 125 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 HOXB1P14653 301 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-214ENST00000490398 CBR1P16152 277 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 CAPZA2P47755 286 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 IDH3GP51553 393 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-214ENST00000490398 VLDLRP98155 873 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 MYBPC1Q00872 1141 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 NAAAQ02083 359 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 HGFACQ04756 655 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 PIGFQ07326 219 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 FXNQ16595 210 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 IQCCQ4KMZ1 466 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 ARMC4Q5T2S8 1044 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 IGFN1Q86VF2 1251 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 PGAM4Q8N0Y7 254 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 ANKS4BQ8N8V4 417 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 ZNF566Q969W8 418 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 SLC25A44Q96H78 314 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-214ENST00000490398 MS4A3Q96HJ5 214 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 ADAD1Q96M93 576 aaKnown RBP15.75■□□□□ 0.11
COL9A3-214ENST00000490398 ZNF75AQ96N20 296 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 NDUFAF4Q9P032 175 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 ENPP4Q9Y6X5 453 aa15.75■□□□□ 0.11
COL9A3-214ENST00000490398 NIPBLQ6KC79 2804 aaeCLIP15.74■□□□□ 0.11
COL9A3-214ENST00000490398 hCG_2039718K7EN88 272 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 TRMUO75648 421 aaKnown RBP15.74■□□□□ 0.11
COL9A3-214ENST00000490398 DCTN3O75935 186 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 BCL10O95999 233 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 PRKCDQ05655 676 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 HIST3H3Q16695 136 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 MST1LQ2TV78 715 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 C1QTNF12Q5T7M4 302 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 ZNF627Q7L945 461 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 DEFB107AQ8IZN7 70 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 MUC15Q8N387 334 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 LRRC75AQ8NAA5 344 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 SYT14Q8NB59 555 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 OR13C2Q8NGS9 318 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 TNFRSF13CQ96RJ3 184 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 FOXB1Q99853 325 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 CACNG6Q9BXT2 260 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 MRPL13Q9BYD1 178 aaKnown RBP15.74■□□□□ 0.11
COL9A3-214ENST00000490398 NMNAT1Q9HAN9 279 aaPredicted RBP15.74■□□□□ 0.11
COL9A3-214ENST00000490398 B3GAT2Q9NPZ5 323 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 INIPQ9NRY2 104 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 HIF3AQ9Y2N7 669 aa15.74■□□□□ 0.11
COL9A3-214ENST00000490398 TRAV27A0A087WT01 109 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 IGKV1D-43A0A0B4J1Z2 117 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 CDC42EP2O14613 210 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 SMAD7O15105 426 aaKnown RBP15.73■□□□□ 0.11
COL9A3-214ENST00000490398 TMCC2O75069 709 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 SEMG1P04279 462 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 QDPRP09417 244 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 CD79AP11912 226 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 HSD17B1P14061 328 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 ZNF26P17031 533 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-214ENST00000490398 GPR4P46093 362 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 NPRL3Q12980 569 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 AGAP6Q5VW22 663 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 Q71RC1 249 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-214ENST00000490398 SKA3Q8IX90 412 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 DEPDC4Q8N2C3 294 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 CLDN22Q8N7P3 220 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 OR51A7Q8NH64 312 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 SLC7A13Q8TCU3 470 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 ACOT11Q8WXI4 607 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-214ENST00000490398 HDAC2Q92769 488 aaKnown RBP15.73■□□□□ 0.11
COL9A3-214ENST00000490398 MCHR2Q969V1 340 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 C18orf12Q96KH6 178 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 COX4I2Q96KJ9 171 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 SEPHS2Q99611 448 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 KATNB1Q9BVA0 655 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 GRIP2Q9C0E4 1043 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 GORASP2Q9H8Y8 452 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 CBLN4Q9NTU7 201 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 RPS6KA6Q9UK32 745 aa15.73■□□□□ 0.11
COL9A3-214ENST00000490398 TRBV4-1A0A0J9YWV2 114 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 A0A1W2PRG6 482 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 ARPC2O15144 300 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 DHHO43323 396 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 FAM107AO95990 144 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 INHBBP09529 407 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 T-ENOLP0DO92 83 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 FOSL1P15407 271 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 ACADSP16219 412 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 ACVR1BP36896 505 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 FMODQ06828 376 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 TOP3AQ13472 1001 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-214ENST00000490398 KRT72Q14CN4 511 aa15.72■□□□□ 0.11
COL9A3-214ENST00000490398 SEC23BQ15437 767 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms