RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 PRSS27Q9BQR3 290 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF426Q9BUY5 554 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 C12orf10Q9HB07 376 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 ACOT13Q9NPJ3 140 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 MRPS18AQ9NVS2 196 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 CLEC4AQ9UMR7 237 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 ACANP16112 2415 aa8.37□□□□□ -1.07
TMEM39A-208ENST00000486159 ABCA4P78363 2273 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 CENPVL1A0A0U1RR11 272 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 OR2M5A3KFT3 312 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 UNC119BA6NIH7 251 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC22A20A6NK97 555 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 EIF4E2O60573 245 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 SOX14O95416 240 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 NTN1O95631 604 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 PLAUP00749 431 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 MT-ND2P03891 347 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 THY1P04216 161 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 PNMTP11086 282 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 FUT4P22083 530 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 HTR2AP28223 471 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 GRK5P34947 590 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 PEX19P40855 299 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 ACAA2P42765 397 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 DSCR4P56555 118 aaPredicted RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 LTBQ06643 244 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 ST3GAL4Q11206 333 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 DYNC1I2Q13409 638 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 TMED1Q13445 227 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 EFR3AQ14156 821 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 IRF3Q14653 427 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 PON3Q15166 354 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 SMN1Q16637 294 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 ANKDD1AQ495B1 522 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 GPR107Q5VW38 600 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF620Q6ZNG0 422 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 MISPQ8IVT2 679 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 GATSQ8NAP1 163 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 OR2T33Q8NG76 320 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 OR52L1Q8NGH7 329 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 TMEM163Q8TC26 289 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 UBE2FQ969M7 185 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 C12orf43Q96C57 262 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 PIK3IP1Q96FE7 263 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 FAM46AQ96IP4 442 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 FN3KQ9H479 309 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 UBTD1Q9HAC8 227 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 CTPS2Q9NRF8 586 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 TBC1D23Q9NUY8 699 aa8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 WARS2Q9UGM6 360 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 MRPS18CQ9Y3D5 142 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-208ENST00000486159 ANK3Q12955 4377 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 NPIPA5A0A0B4J1W7 369 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 A0A1B0GWA3 101 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 CLDN24A6NM45 220 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 NPIPA7E9PJI5 369 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 H3BMQ9 156 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 PRODHO43272 600 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 UTS2O95399 124 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 LY6G6DO95868 133 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 THBDP07204 575 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 GKN3PP0CG01 181 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 NPIPA8P0DM63 369 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 UBL4AP11441 157 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 PEPDP12955 493 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 PRG2P13727 222 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 CCNA2P20248 432 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 IL11P20809 199 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 CD79BP40259 229 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC9A3P48764 834 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 HOXC5Q00444 222 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 RAB40BQ12829 278 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 SNAPC1Q16533 368 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 PGGHGQ32M88 737 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ALG10BQ5I7T1 473 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ARMC4Q5T2S8 1044 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 TMEM236Q5W0B7 351 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 WBP2NLQ6ICG8 309 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 LINC00299Q6ZSB3 139 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF367Q7RTV3 350 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 GGNQ86UU5 652 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF614Q8N883 585 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 TCEANCQ8N8B7 351 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 OR4C3Q8NH37 302 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 TMEM255BQ8WV15 326 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF524Q96C55 264 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 BPIFA2Q96DR5 249 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 C1GALT1C1Q96EU7 318 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 TMEM80Q96HE8 168 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 PLEKHA8Q96JA3 519 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 COG8Q96MW5 612 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ZFP3Q96NJ6 502 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 GPA33Q99795 319 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 TSSK6Q9BXA6 273 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 NDEL1Q9GZM8 345 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 LAT2Q9GZY6 243 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 PIGMQ9H3S5 423 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms