RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 APOC3P02656 99 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 GP1BAP07359 652 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CD3EP07766 207 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 AKAIN1P0CW23 69 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 C8orf89P0DMQ9 161 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CLUP10909 449 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 LAMP2P13473 410 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 APEHP13798 732 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 HLA-GP17693 338 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ADRA2CP18825 462 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 FUT1P19526 365 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CNR1P21554 472 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 MPZP25189 248 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PAX6P26367 422 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PEBP1P30086 187 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PPM1AP35813 382 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CCR2P41597 374 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 METAP1P53582 386 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC16A1P53985 500 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CLDN2P57739 230 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 RPS4XP62701 263 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 RPS15P62841 145 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SRSF3P84103 164 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 STX4Q12846 297 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 OR2F1Q13607 317 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ELAVL3Q14576 367 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PON3Q15166 354 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ZMYND11Q15326 602 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 MLF2Q15773 248 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 GPR162Q16538 588 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 C2orf68Q2NKX9 166 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 HNRNPA1L2Q32P51 320 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 NDUFAF6Q330K2 333 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 Q499Y3 187 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 FAM74A3Q4VXF1 159 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 LY6G6FQ5SQ64 297 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 C10orf91Q5T1B1 145 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 MRPL2Q5T653 305 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 DCAF12L2Q5VW00 463 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 JMJD6Q6NYC1 403 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ANKRD16Q6P6B7 361 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 STAC2Q6ZMT1 411 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 DPY19L2P2Q6ZN68 376 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 C17orf107Q6ZR85 190 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 USP53Q70EK8 1073 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PGAP1Q75T13 922 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 RTL10Q7L3V2 364 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 FCRLAQ7L513 359 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 RAB11FIP2Q7L804 512 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ANKRD33Q7Z3H0 272 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF227Q86WZ6 799 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF595Q8IYB9 648 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 DND1Q8IYX4 353 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 MUC20Q8N307 709 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CDRT4Q8N9R6 151 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CYB561A3Q8NBI2 242 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SDR9C7Q8NEX9 313 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 OR2L3Q8NG85 312 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 OR5M8Q8NGP6 311 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 GPR148Q8TDV2 347 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SNX33Q8WV41 574 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CCDC107Q8WV48 283 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 HERVK_113Q902F9 699 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PIGKQ92643 395 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 GCDHQ92947 438 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 RAB7BQ96AH8 199 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ZMYND19Q96E35 227 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 MNTQ99583 582 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 NRTNQ99748 197 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PDCD1LG2Q9BQ51 273 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC19A3Q9BZV2 496 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 TRIM2Q9C040 744 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SEMA4CQ9C0C4 833 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 TWSG1Q9GZX9 223 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 MFFQ9GZY8 342 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SLITRK2Q9H156 845 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 C6orf106Q9H6K1 298 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF552Q9H707 407 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SYNPO2LQ9H987 977 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SCPEP1Q9HB40 452 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM27Q9HBJ8 222 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 MRPS30Q9NP92 439 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 C2orf42Q9NWW7 574 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 COA4Q9NYJ1 87 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ACTR10Q9NZ32 417 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PRR13Q9NZ81 148 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 UPB1Q9UBR1 384 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 KLK11Q9UBX7 282 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 APOBEC3BQ9UH17 382 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 KCNE5Q9UJ90 142 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 GNG8Q9UK08 70 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 FBXL4Q9UKA2 621 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PCDHB10Q9UN67 800 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 TNFSF18Q9UNG2 199 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PLEKHA6Q9Y2H5 1048 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 CARHSP1Q9Y2V2 147 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 ENTPD2Q9Y5L3 495 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 SRCAPQ6ZRS2 3230 aa4.26□□□□□ -1.73
SMARCC1-206ENST00000485737 PLXND1Q9Y4D7 1925 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms