RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 POFUT2Q9Y2G5 429 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 MAGED1Q9Y5V3 778 aaPredicted RBP18.33■□□□□ 0.52
SEC13-217ENST00000482647 LYVE1Q9Y5Y7 322 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 A0A096LPE4 126 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 A0A1W2PPZ6 126 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 UNC119BA6NIH7 251 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 ZNF99A8MXY4 864 aaPredicted RBP18.32■□□□□ 0.52
SEC13-217ENST00000482647 EBAG9O00559 213 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 PGA4P0DJD7 388 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 PGA3P0DJD8 388 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 ACADSP16219 412 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 PAX7P23759 505 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 LOXP28300 417 aaPredicted RBP18.32■□□□□ 0.52
SEC13-217ENST00000482647 UBE2NP61088 152 aaKnown RBP18.32■□□□□ 0.52
SEC13-217ENST00000482647 OR2T5Q6IEZ7 315 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 SEZ6L2Q6UXD5 910 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 IGFN1Q86VF2 1251 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 LRRC75AQ8NAA5 344 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 OR2T29Q8NH02 315 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 CANT1Q8WVQ1 401 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 RSRC1Q96IZ7 334 aaKnown RBP18.32■□□□□ 0.52
SEC13-217ENST00000482647 HS3ST6Q96QI5 342 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 MRPL13Q9BYD1 178 aaKnown RBP18.32■□□□□ 0.52
SEC13-217ENST00000482647 PLEKHF2Q9H8W4 249 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 REEP1Q9H902 201 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 ZNF346Q9UL40 294 aaKnown RBP18.32■□□□□ 0.52
SEC13-217ENST00000482647 SPG11Q96JI7 2443 aa18.32■□□□□ 0.52
SEC13-217ENST00000482647 HRNRQ86YZ3 2850 aaPredicted RBP18.32■□□□□ 0.52
SEC13-217ENST00000482647 ALPK2Q86TB3 2170 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 IGHMP01871 453 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 CD3EP07766 207 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 RPL27P61353 136 aaKnown RBP18.31■□□□□ 0.52
SEC13-217ENST00000482647 RUNX1T1Q06455 604 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 TOP3AQ13472 1001 aaPredicted RBP18.31■□□□□ 0.52
SEC13-217ENST00000482647 NCMAPQ5T1S8 102 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 FAM205BPQ63HN1 556 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 LRFN4Q6PJG9 635 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 TMEM108Q6UXF1 575 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 YY1AP1Q9H869 796 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 SIGLEC7Q9Y286 467 aa18.31■□□□□ 0.52
SEC13-217ENST00000482647 SAMHD1Q9Y3Z3 626 aaKnown RBP18.31■□□□□ 0.52
SEC13-217ENST00000482647 CSMD2Q7Z408 3487 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 ARPC4-TTLL3A0A0A6YYG9 625 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 A0A1W2PPR1 153 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 TCRBV3S1A0A5B6 114 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 DPRXA6NFQ7 191 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 A6NIZ1 184 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 TRMUO75648 421 aaKnown RBP18.3■□□□□ 0.52
SEC13-217ENST00000482647 NDUFB2O95178 105 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 CD14P08571 375 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 QDPRP09417 244 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 FPR3P25089 353 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 ACVR1BP36896 505 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 ZNF83P51522 516 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 RAP1BP61224 184 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 RAP1AP62834 184 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 BSPH1Q075Z2 132 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 HIST3H3Q16695 136 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 C1orf94Q6P1W5 598 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 CDH24Q86UP0 819 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 CCDC36Q8IYA8 594 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 SYT14Q8NB59 555 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 OR4C15Q8NGM1 316 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 GNPDA2Q8TDQ7 276 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 GPA33Q99795 319 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 TMEM204Q9BSN7 226 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 KATNB1Q9BVA0 655 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 C1QTNF6Q9BXI9 259 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 MOV10Q9HCE1 1003 aaKnown RBP18.3■□□□□ 0.52
SEC13-217ENST00000482647 NPAP1Q9NZP6 1156 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 GRHPRQ9UBQ7 328 aa18.3■□□□□ 0.52
SEC13-217ENST00000482647 PDZD2O15018 2839 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 CCNB2O95067 398 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 CST1P01037 141 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 NR2C1P13056 603 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 ZNF26P17031 533 aaPredicted RBP18.29■□□□□ 0.52
SEC13-217ENST00000482647 PTAFRP25105 342 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 ERVK-25P63136 954 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 GK3PQ14409 553 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 SMARCD3Q6STE5 483 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 ZNF813Q6ZN06 617 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 ZNF704Q6ZNC4 412 aaPredicted RBP18.29■□□□□ 0.52
SEC13-217ENST00000482647 ZNF627Q7L945 461 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 NOXO1Q8NFA2 376 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 NRGNQ92686 78 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 MCHR2Q969V1 340 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 TSPAN32Q96QS1 320 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 ALG12Q9BV10 488 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 NELFAQ9H3P2 528 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 RNF115Q9Y4L5 304 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 U3KQV3 271 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 CSMD1Q96PZ7 3565 aa18.29■□□□□ 0.52
SEC13-217ENST00000482647 M0R1B8 84 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 GNGT2O14610 69 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 DHHO43323 396 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 C1orf146Q5VVC0 180 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 PGBD2Q6P3X8 592 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 DPY19L2P2Q6ZN68 376 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 ASRGL1Q7L266 308 aa18.28■□□□□ 0.52
SEC13-217ENST00000482647 ARIH2OSQ8N7S6 290 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms