RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TGM4P49221 684 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 SLC26A5P58743 744 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 CDC20Q12834 499 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 GPR157Q5UAW9 335 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 SPRED2Q7Z698 418 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 SMAP2Q8WU79 429 aaPredicted RBP13.15□□□□□ -0.3
COL20A1-206ENST00000479501 PHYHIPQ92561 330 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 ZG16BQ96DA0 208 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 CDC6Q99741 560 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 PLA2G12AQ9BZM1 189 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 TCEAL2Q9H3H9 227 aaPredicted RBP13.15□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF160Q9HCG1 818 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 AKIP1Q9NQ31 210 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 A8MVM7 634 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 GAAP10253 952 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 ALDH3B1P43353 468 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 PPICP45877 212 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 SPOCK1Q08629 439 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 SELENBP1Q13228 472 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 C12orf73Q69YU5 71 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 Q6ZS52 159 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 EDAQ92838 391 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 FGF20Q9NP95 211 aaPredicted RBP13.15□□□□□ -0.3
COL20A1-206ENST00000479501 C2CD4DB7Z1M9 353 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 C5orf67F2Z3F1 127 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 M0R082 166 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 SELENOFO60613 162 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 DNAJB6O75190 326 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 LALBAP00709 142 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 IGHG1P01857 330 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 HIST1H1CP16403 213 aaKnown RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 IDH3GP51553 393 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 GFERP55789 205 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 AGERQ15109 404 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 HYAL4Q2M3T9 481 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 RABEPKQ7Z6M1 372 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 OR5D14Q8NGL3 314 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 DOK1Q99704 481 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 EMC7Q9NPA0 242 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 SLC52A3Q9NQ40 469 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 PCM1Q15154 2024 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 SNRNP70P08621 437 aaKnown RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 TMEM225BP0DP42 221 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 CSNK1A1P48729 337 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 RPS27AP62979 156 aaKnown RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 UBA52P62987 128 aaKnown RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 NKX6-1P78426 367 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 MESP2Q0VG99 397 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ZNF674Q2M3X9 581 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ABHD17BQ5VST6 288 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 BEND4Q6ZU67 534 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ABHD12BQ7Z5M8 362 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 UBE2ZQ9H832 354 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 SIRT3Q9NTG7 399 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 NSG1A0A0A6YYJ2 146 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 OR6C65A6NJZ3 312 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 FADS1O60427 444 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ZNF28P17035 718 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 RAB3AP20336 220 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 HTR4Q13639 388 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 TMEM176BQ3YBM2 270 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 VWA2Q5GFL6 755 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 UCN3Q969E3 161 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 OR2A5Q96R48 311 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 PRRT1Q99946 306 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 PLEK2Q9NYT0 353 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 LSM5Q9Y4Y9 91 aaKnown RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 RGPD3A6NKT7 1758 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 SMCO3A2RU48 225 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 H0YIG0 161 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 EIF4E2O60573 245 aaKnown RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ASAH1Q13510 395 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ALKBH1Q13686 389 aaKnown RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ZNF169Q14929 603 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-206ENST00000479501 MEP1BQ16820 701 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 NDUFAF7Q7L592 441 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 SIAH3Q8IW03 269 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ZFAND1Q8TCF1 268 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 NPRL2Q8WTW4 380 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ARHGDIGQ99819 225 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 ARHGAP9Q9BRR9 750 aa13.14□□□□□ -0.31
COL20A1-206ENST00000479501 PRKNO60260 465 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 RAB6AP20340 208 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 COL9A1P20849 921 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 VEGFCP49767 419 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 CSNK2A1P68400 391 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 UBE2NLQ5JXB2 153 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 VN1R4Q7Z5H5 301 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 CSNK2A3Q8NEV1 391 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 OR4M1Q8NGD0 313 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 C3orf49Q96BT1 292 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 FOXRED1Q96CU9 486 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 HCAR1Q9BXC0 346 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 IL20Q9NYY1 176 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 UBE2J1Q9Y385 318 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms