RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 RNF223E7ERA6 249 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 PRDX6P30041 224 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 SERPINF1P36955 418 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 IDH3GP51553 393 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-215ENST00000478473 SLC7A2P52569 658 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 ZNF133P52736 654 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-215ENST00000478473 EFNA4P52798 201 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 RPL18Q07020 188 aaKnown RBP20.31■□□□□ 0.84
C9orf3-215ENST00000478473 ST3GAL3Q11203 375 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 NRN1LQ496H8 165 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 ZNF813Q6ZN06 617 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 CBLL1Q75N03 491 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 PFN4Q8NHR9 129 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 ZNF566Q969W8 418 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 SGTBQ96EQ0 304 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 GMPR2Q9P2T1 348 aaKnown RBP20.31■□□□□ 0.84
C9orf3-215ENST00000478473 FBXO9Q9UK97 447 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-215ENST00000478473 MED31Q9Y3C7 131 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 SSX4O60224 188 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 SNX3O60493 162 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 SHOX2O60902 331 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-215ENST00000478473 SEC14L2O76054 403 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 ZNF14P17017 642 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-215ENST00000478473 GSK3BP49841 420 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 NUDT6P53370 316 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 SEC24CP53992 1094 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 GSG1Q2KHT4 349 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 OFCC1Q8IZS5 231 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 CMTM5Q96DZ9 223 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 ELAC2Q9BQ52 826 aaKnown RBP20.3■□□□□ 0.84
C9orf3-215ENST00000478473 PLK3Q9H4B4 646 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 NOX3Q9HBY0 568 aa20.3■□□□□ 0.84
C9orf3-215ENST00000478473 CXCR6O00574 342 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 ENTPD5O75356 428 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 SERPINI2O75830 405 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 BCL10O95999 233 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 F12P00748 615 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-215ENST00000478473 HLA-HP01893 362 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 UMPSP11172 480 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 NANOS1Q8WY41 292 aaKnown RBP20.29■□□□□ 0.84
C9orf3-215ENST00000478473 TPD52L3Q96J77 140 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 RHNO1Q9BSD3 238 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 MAN2C1Q9NTJ4 1040 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 FBXL3Q9UKT7 428 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 HIF3AQ9Y2N7 669 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 CR1P17927 2039 aa20.29■□□□□ 0.84
C9orf3-215ENST00000478473 BLOC1S5-TXNDC5H3BN57 136 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 DHHO43323 396 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 MGRN1O60291 552 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 PRSS23O95084 383 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 UBL3O95164 117 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 IGHG1P01857 330 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 ZNF35P13682 527 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 B4GALT1P15291 398 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 DRD4P21917 467 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 IFNA8P32881 189 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 ARMC4Q5T2S8 1044 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 HDDC2Q7Z4H3 204 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 GEMIN6Q8WXD5 167 aaKnown RBP20.28■□□□□ 0.84
C9orf3-215ENST00000478473 ASB10Q8WXI3 467 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 FBXO17Q96EF6 278 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 TMEM38BQ9NVV0 291 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 STX18Q9P2W9 335 aaKnown RBP20.28■□□□□ 0.84
C9orf3-215ENST00000478473 ABCA1O95477 2261 aa20.28■□□□□ 0.84
C9orf3-215ENST00000478473 IGHV4-30-2A0A087WSY4 118 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 FFAR1O14842 300 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 IFNW1P05000 195 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 CSF3P09919 207 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 OR4A8P0C604 315 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 DAP3P51398 398 aaKnown RBP20.27■□□□□ 0.84
C9orf3-215ENST00000478473 SNRPD2P62316 118 aaKnown RBP20.27■□□□□ 0.84
C9orf3-215ENST00000478473 MELKQ14680 651 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 ANKDD1AQ495B1 522 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 CLEC2AQ6UVW9 174 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 VTCN1Q7Z7D3 282 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 DPPA2Q7Z7J5 298 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 SKA3Q8IX90 412 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 SLC22A24Q8N4F4 322 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 NMD3Q96D46 503 aaKnown RBP20.27■□□□□ 0.84
C9orf3-215ENST00000478473 INIPQ9NRY2 104 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 SNX13Q9Y5W8 968 aa20.27■□□□□ 0.84
C9orf3-215ENST00000478473 ABCA2Q9BZC7 2435 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 A0A1W2PRG6 482 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 OR8G3PP0DMU2 310 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 SLC25A16P16260 332 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 FUT4P22083 530 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 NR4A1P22736 598 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 LSP1P33241 339 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 AQP2P41181 271 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 PPOXP50336 477 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 NUDT2P50583 147 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 RAB1AP62820 205 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 RUNX1T1Q06455 604 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 LOXL1Q08397 574 aaPredicted RBP20.26■□□□□ 0.83
C9orf3-215ENST00000478473 NPRL3Q12980 569 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 TAF11Q15544 211 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 FXNQ16595 210 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 IFI44LQ53G44 452 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 C10orf128Q5T292 105 aa20.26■□□□□ 0.83
C9orf3-215ENST00000478473 RNF113BQ8IZP6 322 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms