RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CRYBG3Q68DQ2 2970 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 UNC119BA6NIH7 251 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 EBAG9O00559 213 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 CST1P01037 141 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 IGHG1P01857 330 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 PGA4P0DJD7 388 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 PGA3P0DJD8 388 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 LOXP28300 417 aaPredicted RBP9□□□□□ -0.97
HDAC6-222ENST00000478095 HOXC12P31275 282 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 RPL4P36578 427 aaKnown RBP9□□□□□ -0.97
HDAC6-222ENST00000478095 SLC9A3P48764 834 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF83P51522 516 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 IST1P53990 364 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 CLRN1P58418 232 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 ERVK-25P63136 954 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 TUBA1BP68363 451 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 TUBA4AP68366 448 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 MYBPC1Q00872 1141 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 TBRG1Q3YBR2 411 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 ZBED5Q49AG3 693 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 BEX5Q5H9J7 111 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 ARMC4Q5T2S8 1044 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 OR2T5Q6IEZ7 315 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 OR7E24Q6IFN5 339 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 KLHL24Q6TFL4 600 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 TUBA1AQ71U36 451 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 ASRGL1Q7L266 308 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 CLDN22Q8N7P3 220 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 LRRC75AQ8NAA5 344 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 SYT14Q8NB59 555 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 C1orf162Q8NEQ5 155 aaPredicted RBP9□□□□□ -0.97
HDAC6-222ENST00000478095 NOXO1Q8NFA2 376 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 OR2T29Q8NH02 315 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 TMEM54Q969K7 222 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 PLPPR2Q96GM1 343 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 SLC25A44Q96H78 314 aaPredicted RBP9□□□□□ -0.97
HDAC6-222ENST00000478095 TSPAN32Q96QS1 320 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 KATNB1Q9BVA0 655 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 LIME1Q9H400 295 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 REEP1Q9H902 201 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 B3GAT2Q9NPZ5 323 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 SLC17A5Q9NRA2 495 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 GLTPQ9NZD2 209 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF346Q9UL40 294 aaKnown RBP9□□□□□ -0.97
HDAC6-222ENST00000478095 ADAM18Q9Y3Q7 739 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 SAMHD1Q9Y3Z3 626 aaKnown RBP9□□□□□ -0.97
HDAC6-222ENST00000478095 SLC25A15Q9Y619 301 aa9□□□□□ -0.97
HDAC6-222ENST00000478095 TCRBV3S1A0A5B6 114 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 RPL36A-HNRNPH2H7BZ11 118 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 H7C1C5 153 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 FKBP6O75344 327 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 TRMUO75648 421 aaKnown RBP8.99□□□□□ -0.97
HDAC6-222ENST00000478095 KRT36O76013 467 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 CCNB2O95067 398 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 SLC2A10O95528 541 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 PLAUP00749 431 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 B4GALT1P15291 398 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 ACADSP16219 412 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 FPR3P25089 353 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 ACVR1BP36896 505 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 FXYD6P3P58550 94 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 PRPS1P60891 318 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 UBE2NP61088 152 aaKnown RBP8.99□□□□□ -0.97
HDAC6-222ENST00000478095 LCN6P62502 163 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 FMODQ06828 376 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 PGBD2Q6P3X8 592 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 ANKRD16Q6P6B7 361 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 P2RY8Q86VZ1 359 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 C17orf78Q8N4C9 275 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 FANK1Q8TC84 345 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 HTRA1Q92743 480 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 HDAC2Q92769 488 aaKnown RBP8.99□□□□□ -0.97
HDAC6-222ENST00000478095 BCL2L2Q92843 193 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-222ENST00000478095 POP5Q969H6 163 aaKnown RBP8.99□□□□□ -0.97
HDAC6-222ENST00000478095 UTP4Q969X6 686 aaKnown RBP8.99□□□□□ -0.97
HDAC6-222ENST00000478095 SLCO4A1Q96BD0 722 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 LRR1Q96L50 414 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 TXNIPQ9H3M7 391 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 NELFAQ9H3P2 528 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-222ENST00000478095 SIGLEC7Q9Y286 467 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 POFUT2Q9Y2G5 429 aa8.99□□□□□ -0.97
HDAC6-222ENST00000478095 NOTCH2Q04721 2471 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 TEX13CA0A0J9YWL9 993 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF503-AS2A6NEH8 195 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 DPRXA6NFQ7 191 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF99A8MXY4 864 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 M0R1B8 84 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 GNGT2O14610 69 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 DHHO43323 396 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 PTP4A3O75365 173 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 CIB2O75838 187 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 NDUFB2O95178 105 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 GOSR1O95249 250 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 IGHMP01871 453 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 QDPRP09417 244 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 IFNGR2P38484 337 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 CAPZA2P47755 286 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 HMGA2P52926 109 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms