RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CGAP01215 116 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 IGHG1P01857 330 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ALPLP05186 524 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 POU1F1P28069 291 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 GRNP28799 593 aaKnown RBP13.55□□□□□ -0.24
SEC13-215ENST00000477547 SDHAP31040 664 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ASCL1P50553 236 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ALDH3A2P51648 485 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 RPL27P61353 136 aaKnown RBP13.55□□□□□ -0.24
SEC13-215ENST00000477547 CAMK2DQ13557 499 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 LRRC36Q1X8D7 754 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ARMC4Q5T2S8 1044 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 LPCAT4Q643R3 524 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 GPR139Q6DWJ6 353 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 FAM122BQ7Z309 247 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 UBE2J2Q8N2K1 259 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 OR6X1Q8NH79 312 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ZNF519Q8TB69 540 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ZNF566Q969W8 418 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 Q96M85 177 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ERMAPQ96PL5 475 aaPredicted RBP13.55□□□□□ -0.24
SEC13-215ENST00000477547 GRHPRQ9UBQ7 328 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 MALT1Q9UDY8 824 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ENOPH1Q9UHY7 261 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ORC6Q9Y5N6 252 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 IER3IP1Q9Y5U9 82 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 A6NIZ1 184 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 BHLHE40O14503 412 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 MSTNO14793 375 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 CASQ2O14958 399 aaPredicted RBP13.54□□□□□ -0.24
SEC13-215ENST00000477547 ATP6V1G2O95670 118 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 APEHP13798 732 aaKnown RBP13.54□□□□□ -0.24
SEC13-215ENST00000477547 PRF1P14222 555 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
SEC13-215ENST00000477547 AGAP20933 346 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 NOS3P29474 1203 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 ACVR1BP36896 505 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 CSNK1A1P48729 337 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 CLRN1P58418 232 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 RAP1BP61224 184 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 RAP1AP62834 184 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 SLC34A1Q06495 639 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 LGALS3BPQ08380 585 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 RIPK1Q13546 671 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 CDSNQ15517 529 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 PGGHGQ32M88 737 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 MESTQ5EB52 335 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 XKRXQ6PP77 449 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 IQCF1Q8N6M8 205 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 POMGNT2Q8NAT1 580 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 OR2T33Q8NG76 320 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 OR6N1Q8NGY5 312 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 OR4Q3Q8NH05 313 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 SLC25A44Q96H78 314 aaPredicted RBP13.54□□□□□ -0.24
SEC13-215ENST00000477547 RIBC2Q9H4K1 309 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 PLSCR4Q9NRQ2 329 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 SLC7A10Q9NS82 523 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 ZNF346Q9UL40 294 aaKnown RBP13.54□□□□□ -0.24
SEC13-215ENST00000477547 BAIAP2Q9UQB8 552 aa13.54□□□□□ -0.24
SEC13-215ENST00000477547 NKX2-6A6NCS4 301 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 OR6C65A6NJZ3 312 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 H7C1C5 153 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 XKRYO14609 159 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 ARPC3O15145 178 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 KRT33AO76009 404 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 CLDN14O95500 239 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 PGA4P0DJD7 388 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 PGA3P0DJD8 388 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 ACADSP16219 412 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 RAD23AP54725 363 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 LCN6P62502 163 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 ESRRGP62508 458 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 RUNX1T1Q06455 604 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 CD47Q08722 323 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 OGFRL1Q5TC84 451 aaPredicted RBP13.53□□□□□ -0.24
SEC13-215ENST00000477547 ADCK1Q86TW2 530 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 GPR137CQ8N3F9 429 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 ARIH2OSQ8N7S6 290 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 LILRB4Q8NHJ6 448 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 HDAC2Q92769 488 aaKnown RBP13.53□□□□□ -0.24
SEC13-215ENST00000477547 SLC29A1Q99808 456 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 GABARAPL3Q9BY60 117 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 ULBP2Q9BZM5 246 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 B3GAT2Q9NPZ5 323 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 UPB1Q9UBR1 384 aa13.53□□□□□ -0.24
SEC13-215ENST00000477547 F8P00451 2351 aa13.52□□□□□ -0.24
SEC13-215ENST00000477547 ZNF587BE7ETH6 402 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 M0R3G1 203 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 ARHGEF9O43307 516 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 UPK3AO75631 287 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
SEC13-215ENST00000477547 TXNDC12O95881 172 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 NR2C1P13056 603 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 CRISP1P54107 249 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 FAPQ12884 760 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 FBXW9Q5XUX1 488 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms