RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ZNF83P51522 516 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 CTXN1P60606 82 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 MYBPC1Q00872 1141 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 TGFBR3Q03167 851 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 BSPH1Q075Z2 132 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 SPOCK1Q08629 439 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 TRAP1Q12931 704 aaKnown RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 TOP3AQ13472 1001 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ARMC4Q5T2S8 1044 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 OR7E24Q6IFN5 339 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 LRFN4Q6PJG9 635 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 RRM2BQ7LG56 351 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ABHD12BQ7Z5M8 362 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 OAFQ86UD1 273 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 CDH24Q86UP0 819 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 P2RY8Q86VZ1 359 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ADGRG5Q8IZF4 528 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 C1orf162Q8NEQ5 155 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 OR6N1Q8NGY5 312 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 CANT1Q8WVQ1 401 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 HTRA1Q92743 480 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 HDAC2Q92769 488 aaKnown RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 TMEM54Q969K7 222 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ZNF566Q969W8 418 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 MUCL1Q96DR8 90 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 SLC25A44Q96H78 314 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 BOD1Q96IK1 185 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 LRR1Q96L50 414 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ADAD1Q96M93 576 aaKnown RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 RAB3IPQ96QF0 476 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ALPK1Q96QP1 1244 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 TSPAN32Q96QS1 320 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ZNF347Q96SE7 839 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 TMEM204Q9BSN7 226 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 MRPL13Q9BYD1 178 aaKnown RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 MAGIXQ9H6Y5 334 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 GLTPQ9NZD2 209 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 IL20RAQ9UHF4 553 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 SLC7A8Q9UHI5 535 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ZNF346Q9UL40 294 aaKnown RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 POMPQ9Y244 141 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 PLEKHA6Q9Y2H5 1048 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 LYVE1Q9Y5Y7 322 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 NAV2Q8IVL1 2488 aa8.48□□□□□ -1.05
HDAC3-208ENST00000476739 HRNRQ86YZ3 2850 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-208ENST00000476739 ROS1P08922 2347 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 IGKV1D-43A0A0B4J1Z2 117 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 A0A1W2PRG6 482 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 HTR3EA5X5Y0 456 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 M0R1B8 84 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 IGHMP01871 453 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ACADSP16219 412 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 CSNK1A1P48729 337 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 SLC9A3P48764 834 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 HMGA2P52926 109 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ERVK-25P63136 954 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 CHRNB3Q05901 458 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 FMODQ06828 376 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 HIST3H3Q16695 136 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ZBED5Q49AG3 693 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 PGBD2Q6P3X8 592 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ANKRD16Q6P6B7 361 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ZNF704Q6ZNC4 412 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-208ENST00000476739 CDK20Q8IZL9 346 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 C17orf78Q8N4C9 275 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 SYT14Q8NB59 555 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 NOXO1Q8NFA2 376 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 KBTBD8Q8NFY9 601 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 OR9Q2Q8NGE9 314 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 OR4C15Q8NGM1 316 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 MCHR2Q969V1 340 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 LRGUKQ96M69 825 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ULBP2Q9BZM5 246 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 TXNIPQ9H3M7 391 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 SEC61A2Q9H9S3 476 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 UBTD1Q9HAC8 227 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 NOX3Q9HBY0 568 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 CCM2LQ9NUG4 571 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ST6GALNAC2Q9UJ37 374 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 AURKCQ9UQB9 309 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 SIGLEC7Q9Y286 467 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 AMDHD2Q9Y303 409 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ADAM18Q9Y3Q7 739 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 U3KQV3 271 aa8.47□□□□□ -1.05
HDAC3-208ENST00000476739 ARPC4-TTLL3A0A0A6YYG9 625 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 TCRBV3S1A0A5B6 114 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 UNC119BA6NIH7 251 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 AQP12BA6NM10 295 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF99A8MXY4 864 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-208ENST00000476739 SHISA9B4DS77 424 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 H7C1C5 153 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 TNFRSF11BO00300 401 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ABCD4O14678 606 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 IMPA2O14732 288 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 OR10H3O60404 316 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ATE1O95260 518 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 SLC2A10O95528 541 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 IGHG1P01857 330 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms