RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 FOXL1Q12952 345 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 STX3Q13277 289 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 C6orf10Q5SRN2 563 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 RBMS3Q6XE24 437 aaKnown RBP17.46■□□□□ 0.39
VPS36-203ENST00000475375 ICA1LQ8NDH6 482 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 SYNPRQ8TBG9 265 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 MAL2Q969L2 176 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 ITCHQ96J02 903 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 TSPAN32Q96QS1 320 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 EPYCQ99645 322 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 WDR55Q9H6Y2 383 aaPredicted RBP17.46■□□□□ 0.39
VPS36-203ENST00000475375 DECR2Q9NUI1 292 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 HAO1Q9UJM8 370 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 WNK2Q9Y3S1 2297 aa17.46■□□□□ 0.39
VPS36-203ENST00000475375 SLC22A23A1A5C7 686 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 CLDN25C9JDP6 229 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 DEAF1O75398 565 aaPredicted RBP17.45■□□□□ 0.38
VPS36-203ENST00000475375 PRSS23O95084 383 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 IGHV2-5P01817 119 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 NUDT7P0C024 238 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 ZCCHC18P0CG32 403 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 DEFA6Q01524 100 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 PUDPQ08623 228 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 RBBP4Q09028 425 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 MMEL1Q495T6 779 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 PDLIM3Q53GG5 364 aaPredicted RBP17.45■□□□□ 0.38
VPS36-203ENST00000475375 NXNQ6DKJ4 435 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 TREML1Q86YW5 311 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 ZNF584Q8IVC4 421 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 WDFY1Q8IWB7 410 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 SKA3Q8IX90 412 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 LSMEM1Q8N8F7 131 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 SCAIQ8N9R8 606 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 SLC30A7Q8NEW0 376 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 BBS10Q8TAM1 723 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 FGFBP3Q8TAT2 258 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 VPS33AQ96AX1 596 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 TIMD4Q96H15 378 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 RNF121Q9H920 327 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 NTN4Q9HB63 628 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 CDH20Q9HBT6 801 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 SLCO1C1Q9NYB5 712 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 WIPI2Q9Y4P8 454 aa17.45■□□□□ 0.38
VPS36-203ENST00000475375 SLC22A3O75751 556 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 BGLAPP02818 100 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 CCL2P13500 99 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 CRYBB2P43320 205 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 ULK3Q6PHR2 472 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 USP51Q70EK9 711 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 PIWIL3Q7Z3Z3 882 aaKnown RBP17.44■□□□□ 0.38
VPS36-203ENST00000475375 C11orf40Q8WZ69 217 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 RAB1CQ92928 201 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 SLC47A1Q96FL8 570 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 SLC41A3Q96GZ6 507 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 GAL3ST1Q99999 423 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 BCL2L10Q9HD36 194 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 A4GALTQ9NPC4 353 aa17.44■□□□□ 0.38
VPS36-203ENST00000475375 C11orf98E9PRG8 122 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 ENTPD5O75356 428 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 MT-ND5P03915 603 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 HKR1P10072 659 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 IDO1P14902 403 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 DRD4P21917 467 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 GATA3P23771 443 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 PRKAR1BP31321 381 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 BIDP55957 195 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 ERVS71-1P61550 626 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 GLO1Q04760 184 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 RGNQ15493 299 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 TSTQ16762 297 aaKnown RBP17.43■□□□□ 0.38
VPS36-203ENST00000475375 HFEQ30201 348 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 RETREG3Q86VR2 466 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 SLC22A24Q8N4F4 322 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 PAQR4Q8N4S7 273 aaPredicted RBP17.43■□□□□ 0.38
VPS36-203ENST00000475375 OR6S1Q8NH40 331 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 MOGAT1Q96PD6 335 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 SH3GL3Q99963 347 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 PAIP2Q9BPZ3 127 aaKnown RBP17.43■□□□□ 0.38
VPS36-203ENST00000475375 MRPL39Q9NYK5 338 aaKnown RBP17.43■□□□□ 0.38
VPS36-203ENST00000475375 TRRAPQ9Y4A5 3859 aa17.43■□□□□ 0.38
VPS36-203ENST00000475375 TRPC5OSA6NMA1 111 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 TM9SF1O15321 606 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 OR8G3PP0DMU2 310 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 LCN2P80188 198 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 KRT71Q3SY84 523 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 FAM91A1Q658Y4 838 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 TMEM53Q6P2H8 277 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 PXKQ7Z7A4 578 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 SIGLECL1Q8N7X8 197 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 ZNF519Q8TB69 540 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 GTF3AQ92664 365 aaKnown RBP17.42■□□□□ 0.38
VPS36-203ENST00000475375 DUX5Q96PT3 197 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 RAD21L1Q9H4I0 556 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 SAP30LQ9HAJ7 183 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 TMEM27Q9HBJ8 222 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 NKIRAS2Q9NYR9 191 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 CACNG2Q9Y698 323 aa17.42■□□□□ 0.38
VPS36-203ENST00000475375 IGLV3-9A0A075B6K5 115 aa17.41■□□□□ 0.38
VPS36-203ENST00000475375 ISPDA4D126 451 aa17.41■□□□□ 0.38
VPS36-203ENST00000475375 LRRN3E7EW58 273 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms