RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PPP1R8Q12972 351 aaKnown RBP11.5□□□□□ -0.57
TPM3-216ENST00000473036 CARD17Q5XLA6 110 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 ZNF730Q6ZMV8 503 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 TMPRSS11FQ6ZWK6 438 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 SLC35D2Q76EJ3 337 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 NANOGNBQ7Z5D8 188 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 BIVMQ86UB2 503 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 HIPK1Q86Z02 1210 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 C20orf196Q8IYI0 205 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 CDK20Q8IZL9 346 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 SVOPLQ8N434 492 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 STEAP2Q8NFT2 490 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 OR4C15Q8NGM1 316 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 OR13C2Q8NGS9 318 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 SLCO4A1Q96BD0 722 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 FAM46AQ96IP4 442 aaKnown RBP11.5□□□□□ -0.57
TPM3-216ENST00000473036 LINC00470Q9BZP3 86 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 TAS2R16Q9NYV7 291 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 UPB1Q9UBR1 384 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 ANK3Q12955 4377 aaKnown RBP11.5□□□□□ -0.57
TPM3-216ENST00000473036 PRRC2AP48634 2157 aaKnown RBP11.5□□□□□ -0.57
TPM3-216ENST00000473036 PLCE1Q9P212 2302 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 ZNF503-AS2A6NEH8 195 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 RPL36A-HNRNPH2H7BZ11 118 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 RNF13O43567 381 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 PTP4A3O75365 173 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 E2F6O75461 281 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 DNASE1P24855 282 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 MPGP29372 298 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 ERFP50548 548 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 BIDP55957 195 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 SPIBQ01892 262 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 SLC34A1Q06495 639 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 TAF11Q15544 211 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 STK11Q15831 433 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 HIKESHIQ53FT3 197 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 FGD3Q5JSP0 725 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 ARMC4Q5T2S8 1044 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 ZER1Q7Z7L7 766 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 IGFN1Q86VF2 1251 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 CDC20BQ86Y33 519 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 ZDHHC13Q8IUH4 622 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 PQLC1Q8N2U9 271 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 POMGNT2Q8NAT1 580 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 ANKK1Q8NFD2 765 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 OR4K5Q8NGD3 323 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 OR51A7Q8NH64 312 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 ASB10Q8WXI3 467 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 TMEM54Q969K7 222 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 BOD1Q96IK1 185 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 CLEC4MQ9H2X3 399 aaPredicted RBP11.49□□□□□ -0.57
TPM3-216ENST00000473036 VCXQ9H320 206 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 PLEKHF2Q9H8W4 249 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 RNPEPL1Q9HAU8 725 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 LYVE1Q9Y5Y7 322 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 SLC25A15Q9Y619 301 aa11.49□□□□□ -0.57
TPM3-216ENST00000473036 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 DPRXA6NFQ7 191 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 OR5H1A6NKK0 313 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 EFCAB9A8MZ26 197 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 M0R3G1 203 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 TNFRSF11BO00300 401 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 SLC43A1O75387 559 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 TIPRLO75663 272 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 OR6A2O95222 327 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 GOSR1O95249 250 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 HIST1H2ABP04908 130 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 PGA4P0DJD7 388 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 PGA3P0DJD8 388 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 ANPEPP15144 967 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 PPP3CBP16298 524 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 CDH2P19022 906 aaPredicted RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 ROR2Q01974 943 aaKnown RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 RCN1Q15293 331 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 ACKR1Q16570 336 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 TIMM23BQ5SRD1 257 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 ZNF770Q6IQ21 691 aaPredicted RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 ALKBH2Q6NS38 261 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 LRFN4Q6PJG9 635 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 THSD4Q6ZMP0 1018 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 HIST3H2AQ7L7L0 130 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 CLDN22Q8N7P3 220 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 OR52N5Q8NH56 324 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 OR6X1Q8NH79 312 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 DNAJC9Q8WXX5 260 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 HSD17B8Q92506 261 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 BCL2L2Q92843 193 aaPredicted RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 HIST1H2ACQ93077 130 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 PIK3IP1Q96FE7 263 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 POLDIP3Q9BY77 421 aaKnown RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 MRPL13Q9BYD1 178 aaKnown RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 CRLF2Q9HC73 371 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 SLC17A5Q9NRA2 495 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 ENOPH1Q9UHY7 261 aa11.48□□□□□ -0.57
TPM3-216ENST00000473036 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 HEATR1Q9H583 2144 aaKnown RBP11.48□□□□□ -0.57
TPM3-216ENST00000473036 RTTNQ86VV8 2226 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms