RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 THBS2P35442 1172 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 HOXD12P35452 270 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 DAP3P51398 398 aaKnown RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 MMP15P51511 669 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 EMP2P54851 167 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 DLX5P56178 289 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 CLDN20P56880 219 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 AP3S2P59780 193 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 LTBQ06643 244 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ZP4Q12836 540 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 TRA2AQ13595 282 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ALKBH1Q13686 389 aaKnown RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 INSL4Q14641 139 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SHBQ15464 509 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 Q499Y3 187 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF684Q5T5D7 378 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 C1orf140Q5VVS0 124 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 PMS2CLQ68D20 193 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 TIGD3Q6B0B8 471 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SLC18B1Q6NT16 456 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 KCTD18Q6PI47 426 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 RPTNQ6XPR3 784 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 COX15Q7KZN9 410 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 HDDC2Q7Z4H3 204 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 PPP1R3BQ86XI6 285 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 TIGD4Q8IY51 512 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 PRSS58Q8IYP2 241 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 OR4M1Q8NGD0 313 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 OR6N2Q8NGY6 317 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 RAB40AQ8WXH6 277 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 NSMAFQ92636 917 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 NEDD4LQ96PU5 975 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 TSPAN32Q96QS1 320 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 OR6C1Q96RD1 312 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 DPAGT1Q9H3H5 408 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 NEK6Q9HC98 313 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SERINC1Q9NRX5 453 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF275Q9NSD4 429 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ACOXLQ9NUZ1 547 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ING3Q9NXR8 418 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 MRPL39Q9NYK5 338 aaKnown RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 VSX1Q9NZR4 365 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 MALT1Q9UDY8 824 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 IKZF2Q9UKS7 526 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF346Q9UL40 294 aaKnown RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 COPS3Q9UNS2 423 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ETV7Q9Y603 341 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 V9GY05 133 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 CEP192Q8TEP8 1941 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 A0A0G2JMP0 313 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 A0A0X1KG70 313 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 TMEM72A0PK05 275 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 PRSS37A4D1T9 235 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 NAP1L6A6NFF2 107 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 TMEM221A6NGB7 291 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 VSTM2BA6NLU5 285 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 IDSB3KWA1 339 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 AIPO00170 330 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 TFECO14948 347 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 GSTZ1O43708 216 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 SSX4O60224 188 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 NPIPB7O75200 414 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 ZFAND5O76080 213 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 LDOC1O95751 146 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 IGLV1-40P01703 118 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 HLA-DQA2P01906 255 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 EIF4EP06730 217 aaKnown RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 DCNP07585 359 aaKnown RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 YES1P07947 543 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 GSTT2BP0CG30 244 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 ALOX5APP20292 161 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 AHCYP23526 432 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 MST1P26927 711 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 KIR2DL3P43628 341 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 CCR9P51686 369 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 ZNF41P51814 821 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 HCCSP53701 268 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 MRPS15P82914 257 aaKnown RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 DYRK1AQ13627 763 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 IL11RAQ14626 422 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 P2RY14Q15391 338 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 KCNJ8Q15842 424 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 COL28A1Q2UY09 1125 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 TBRG1Q3YBR2 411 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 GXYLT1Q4G148 440 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 MESTQ5EB52 335 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 SLC22A10Q63ZE4 541 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 FDX2Q6P4F2 183 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 PAPD4Q6PIY7 484 aaKnown RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 NCCRP1Q6ZVX7 275 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 CPEB2Q7Z5Q1 589 aaKnown RBP6.89□□□□□ -1.31
CCDC171-205ENST00000472806 ZNF227Q86WZ6 799 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 TOMM5Q8N4H5 51 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 ZNF676Q8N7Q3 588 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 OR4M2Q8NGB6 313 aa6.89□□□□□ -1.31
CCDC171-205ENST00000472806 OR6F1Q8NGZ6 308 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms